Gene : Cagra.0594s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11638:SF68 - DOUBLE CLP-N MOTIF-CONTAINING P-LOOP NUCLEOSIDE TRIPHOSPHATE HYDROLASE DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  8
Name:  ? Cagra.0594s0008 Secondary Identifier:  ? PAC:28901661
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0594s0008 0.5kb upstream 0.5kb upstream 3751 true Scaffold594: 31835-35585 Capsella grandiflora
Cagra.0594s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold594: 31835-32334 Capsella grandiflora
Cagra.0594s0008 0.5kb downstream 0.5kb downstream 3751 true Scaffold594: 32335-36085 Capsella grandiflora
Cagra.0594s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold594: 35586-36085 Capsella grandiflora
Cagra.0594s0008 1.0kb upstream 1.0kb upstream 4251 true Scaffold594: 31335-35585 Capsella grandiflora
Cagra.0594s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold594: 31335-32334 Capsella grandiflora
Cagra.0594s0008 1.0kb downstream 1.0kb downstream 4251 true Scaffold594: 32335-36585 Capsella grandiflora
Cagra.0594s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold594: 35586-36585 Capsella grandiflora
Cagra.0594s0008 2.0kb upstream 2.0kb upstream 5251 true Scaffold594: 30335-35585 Capsella grandiflora
Cagra.0594s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold594: 30335-32334 Capsella grandiflora
Cagra.0594s0008 2.0kb downstream 2.0kb downstream 5251 true Scaffold594: 32335-37585 Capsella grandiflora
Cagra.0594s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold594: 35586-37585 Capsella grandiflora
Cagra.0594s0008 5.0kb upstream 5.0kb upstream 8251 true Scaffold594: 27335-35585 Capsella grandiflora
Cagra.0594s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold594: 27335-32334 Capsella grandiflora
Cagra.0594s0008 5.0kb downstream 5.0kb downstream 8251 true Scaffold594: 32335-40585 Capsella grandiflora
Cagra.0594s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold594: 35586-40585 Capsella grandiflora
Cagra.0594s0008 10.0kb upstream 10.0kb upstream 13251 true Scaffold594: 22335-35585 Capsella grandiflora
Cagra.0594s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold594: 22335-32334 Capsella grandiflora
Cagra.0594s0008 10.0kb downstream 10.0kb downstream 13251 true Scaffold594: 32335-45585 Capsella grandiflora
Cagra.0594s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold594: 35586-45585 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369438 5261 Brassicaceae View MSA
123838381 5264 Brassicales-Malvales View MSA
124339611 5266 SBM View MSA
124251457 5268 Malvidae View MSA
124066769 5270 Rosid View MSA
123749944 5271 Pentapetalae View MSA
122787695 5272 Eudicot View MSA
122043701 5273 Angiosperm View MSA
121351273 5274 Embryophyte View MSA
123382090 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain