Gene : Cagra.0596s0002 C. grandiflora v1.1
Genomic Order:  2 Name:  ? Cagra.0596s0002
Secondary Identifier:  ? PAC:28920023
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0002 0.5kb upstream 0.5kb upstream 2336 true Scaffold596: 4486-6821 Capsella grandiflora
Cagra.0596s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 4486-4985 Capsella grandiflora
Cagra.0596s0002 0.5kb downstream 0.5kb downstream 2336 true Scaffold596: 4986-7321 Capsella grandiflora
Cagra.0596s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 6822-7321 Capsella grandiflora
Cagra.0596s0002 1.0kb upstream 1.0kb upstream 2836 true Scaffold596: 3986-6821 Capsella grandiflora
Cagra.0596s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 3986-4985 Capsella grandiflora
Cagra.0596s0002 1.0kb downstream 1.0kb downstream 2836 true Scaffold596: 4986-7821 Capsella grandiflora
Cagra.0596s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 6822-7821 Capsella grandiflora
Cagra.0596s0002 2.0kb upstream 2.0kb upstream 3836 true Scaffold596: 2986-6821 Capsella grandiflora
Cagra.0596s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 2986-4985 Capsella grandiflora
Cagra.0596s0002 2.0kb downstream 2.0kb downstream 3836 true Scaffold596: 4986-8821 Capsella grandiflora
Cagra.0596s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 6822-8821 Capsella grandiflora
Cagra.0596s0002 5.0kb upstream 5.0kb upstream 6821 true Scaffold596: 1-6821 Capsella grandiflora
Cagra.0596s0002 5.0kb upstream 5.0kb upstream 4985 false Scaffold596: 1-4985 Capsella grandiflora
Cagra.0596s0002 5.0kb downstream 5.0kb downstream 6836 true Scaffold596: 4986-11821 Capsella grandiflora
Cagra.0596s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 6822-11821 Capsella grandiflora
Cagra.0596s0002 10.0kb upstream 10.0kb upstream 6821 true Scaffold596: 1-6821 Capsella grandiflora
Cagra.0596s0002 10.0kb upstream 10.0kb upstream 4985 false Scaffold596: 1-4985 Capsella grandiflora
Cagra.0596s0002 10.0kb downstream 10.0kb downstream 11836 true Scaffold596: 4986-16821 Capsella grandiflora
Cagra.0596s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 6822-16821 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362543 5261 Brassicaceae View MSA
123834498 5264 Brassicales-Malvales View MSA
124338132 5266 SBM View MSA
124250690 5268 Malvidae View MSA
124064605 5270 Rosid View MSA
123736414 5271 Pentapetalae View MSA
122787286 5272 Eudicot View MSA
122043306 5273 Angiosperm View MSA
121345259 5274 Embryophyte View MSA
123424923 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain