Gene : Cagra.0596s0020 C. grandiflora v1.1
Defline:  (1 of 5) 2.7.2.4 - Aspartate kinase / Aspartokinase Genomic Order:  20
Name:  ? Cagra.0596s0020 Secondary Identifier:  ? PAC:28920009
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora HOMOSERSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-3001 Capsella grandiflora pathologic  
Cgrandiflora PWY-5097 Capsella grandiflora pathologic  
Cgrandiflora PWY-724 Capsella grandiflora pathologic  
Cgrandiflora THRESYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0020 0.5kb upstream 0.5kb upstream 3978 true Scaffold596: 94286-98263 Capsella grandiflora
Cagra.0596s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 94286-94785 Capsella grandiflora
Cagra.0596s0020 0.5kb downstream 0.5kb downstream 3978 true Scaffold596: 94786-98763 Capsella grandiflora
Cagra.0596s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 98264-98763 Capsella grandiflora
Cagra.0596s0020 1.0kb upstream 1.0kb upstream 4478 true Scaffold596: 93786-98263 Capsella grandiflora
Cagra.0596s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 93786-94785 Capsella grandiflora
Cagra.0596s0020 1.0kb downstream 1.0kb downstream 4478 true Scaffold596: 94786-99263 Capsella grandiflora
Cagra.0596s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 98264-99263 Capsella grandiflora
Cagra.0596s0020 2.0kb upstream 2.0kb upstream 5478 true Scaffold596: 92786-98263 Capsella grandiflora
Cagra.0596s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 92786-94785 Capsella grandiflora
Cagra.0596s0020 2.0kb downstream 2.0kb downstream 5478 true Scaffold596: 94786-100263 Capsella grandiflora
Cagra.0596s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 98264-100263 Capsella grandiflora
Cagra.0596s0020 5.0kb upstream 5.0kb upstream 8478 true Scaffold596: 89786-98263 Capsella grandiflora
Cagra.0596s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 89786-94785 Capsella grandiflora
Cagra.0596s0020 5.0kb downstream 5.0kb downstream 8478 true Scaffold596: 94786-103263 Capsella grandiflora
Cagra.0596s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 98264-103263 Capsella grandiflora
Cagra.0596s0020 10.0kb upstream 10.0kb upstream 13478 true Scaffold596: 84786-98263 Capsella grandiflora
Cagra.0596s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 84786-94785 Capsella grandiflora
Cagra.0596s0020 10.0kb downstream 10.0kb downstream 13478 true Scaffold596: 94786-108263 Capsella grandiflora
Cagra.0596s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 98264-108263 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374428 5261 Brassicaceae View MSA
123829036 5264 Brassicales-Malvales View MSA
124321571 5266 SBM View MSA
124169039 5268 Malvidae View MSA
124064113 5270 Rosid View MSA
123738935 5271 Pentapetalae View MSA
122796231 5272 Eudicot View MSA
122050797 5273 Angiosperm View MSA
121346150 5274 Embryophyte View MSA
123424787 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain