Gene : Cagra.0596s0016 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22504 - REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1 Genomic Order:  16
Name:  ? Cagra.0596s0016 Secondary Identifier:  ? PAC:28920067
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0016 0.5kb upstream 0.5kb upstream 2589 true Scaffold596: 69183-71771 Capsella grandiflora
Cagra.0596s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 71272-71771 Capsella grandiflora
Cagra.0596s0016 0.5kb downstream 0.5kb downstream 2589 true Scaffold596: 68683-71271 Capsella grandiflora
Cagra.0596s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 68683-69182 Capsella grandiflora
Cagra.0596s0016 1.0kb upstream 1.0kb upstream 3089 true Scaffold596: 69183-72271 Capsella grandiflora
Cagra.0596s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 71272-72271 Capsella grandiflora
Cagra.0596s0016 1.0kb downstream 1.0kb downstream 3089 true Scaffold596: 68183-71271 Capsella grandiflora
Cagra.0596s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 68183-69182 Capsella grandiflora
Cagra.0596s0016 2.0kb upstream 2.0kb upstream 4089 true Scaffold596: 69183-73271 Capsella grandiflora
Cagra.0596s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 71272-73271 Capsella grandiflora
Cagra.0596s0016 2.0kb downstream 2.0kb downstream 4089 true Scaffold596: 67183-71271 Capsella grandiflora
Cagra.0596s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 67183-69182 Capsella grandiflora
Cagra.0596s0016 5.0kb upstream 5.0kb upstream 7089 true Scaffold596: 69183-76271 Capsella grandiflora
Cagra.0596s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 71272-76271 Capsella grandiflora
Cagra.0596s0016 5.0kb downstream 5.0kb downstream 7089 true Scaffold596: 64183-71271 Capsella grandiflora
Cagra.0596s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 64183-69182 Capsella grandiflora
Cagra.0596s0016 10.0kb upstream 10.0kb upstream 12089 true Scaffold596: 69183-81271 Capsella grandiflora
Cagra.0596s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 71272-81271 Capsella grandiflora
Cagra.0596s0016 10.0kb downstream 10.0kb downstream 12089 true Scaffold596: 59183-71271 Capsella grandiflora
Cagra.0596s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 59183-69182 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372796 5261 Brassicaceae View MSA
123833587 5264 Brassicales-Malvales View MSA
124342068 5266 SBM View MSA
124244624 5268 Malvidae View MSA
124066988 5270 Rosid View MSA
123748418 5271 Pentapetalae View MSA
122792340 5272 Eudicot View MSA
122047316 5273 Angiosperm View MSA
121345866 5274 Embryophyte View MSA
123424535 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain