Gene : Cagra.0596s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR32295:SF35 - PROTEIN IQ-DOMAIN 11 Genomic Order:  35
Name:  ? Cagra.0596s0035 Secondary Identifier:  ? PAC:28920017
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0035 0.5kb upstream 0.5kb upstream 3302 true Scaffold596: 158716-162017 Capsella grandiflora
Cagra.0596s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 158716-159215 Capsella grandiflora
Cagra.0596s0035 0.5kb downstream 0.5kb downstream 3302 true Scaffold596: 159216-162517 Capsella grandiflora
Cagra.0596s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 162018-162517 Capsella grandiflora
Cagra.0596s0035 1.0kb upstream 1.0kb upstream 3802 true Scaffold596: 158216-162017 Capsella grandiflora
Cagra.0596s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 158216-159215 Capsella grandiflora
Cagra.0596s0035 1.0kb downstream 1.0kb downstream 3802 true Scaffold596: 159216-163017 Capsella grandiflora
Cagra.0596s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 162018-163017 Capsella grandiflora
Cagra.0596s0035 2.0kb upstream 2.0kb upstream 4802 true Scaffold596: 157216-162017 Capsella grandiflora
Cagra.0596s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 157216-159215 Capsella grandiflora
Cagra.0596s0035 2.0kb downstream 2.0kb downstream 4802 true Scaffold596: 159216-164017 Capsella grandiflora
Cagra.0596s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 162018-164017 Capsella grandiflora
Cagra.0596s0035 5.0kb upstream 5.0kb upstream 7802 true Scaffold596: 154216-162017 Capsella grandiflora
Cagra.0596s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 154216-159215 Capsella grandiflora
Cagra.0596s0035 5.0kb downstream 5.0kb downstream 7802 true Scaffold596: 159216-167017 Capsella grandiflora
Cagra.0596s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 162018-167017 Capsella grandiflora
Cagra.0596s0035 10.0kb upstream 10.0kb upstream 12802 true Scaffold596: 149216-162017 Capsella grandiflora
Cagra.0596s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 149216-159215 Capsella grandiflora
Cagra.0596s0035 10.0kb downstream 10.0kb downstream 12802 true Scaffold596: 159216-172017 Capsella grandiflora
Cagra.0596s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 162018-172017 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366526 5261 Brassicaceae View MSA
123834501 5264 Brassicales-Malvales View MSA
124345092 5266 SBM View MSA
124239176 5268 Malvidae View MSA
124062975 5270 Rosid View MSA
123737265 5271 Pentapetalae View MSA
122794904 5272 Eudicot View MSA
122049723 5273 Angiosperm View MSA
121311558 5274 Embryophyte View MSA
123348838 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain