Gene : Cagra.0596s0033 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10134:SF1 - CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL Genomic Order:  33
Name:  ? Cagra.0596s0033 Secondary Identifier:  ? PAC:28920019
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-7279 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0596s0033 0.5kb upstream 0.5kb upstream 2584 true Scaffold596: 153936-156519 Capsella grandiflora
Cagra.0596s0033 0.5kb upstream 0.5kb upstream 500 false Scaffold596: 156020-156519 Capsella grandiflora
Cagra.0596s0033 0.5kb downstream 0.5kb downstream 2584 true Scaffold596: 153436-156019 Capsella grandiflora
Cagra.0596s0033 0.5kb downstream 0.5kb downstream 500 false Scaffold596: 153436-153935 Capsella grandiflora
Cagra.0596s0033 1.0kb upstream 1.0kb upstream 3084 true Scaffold596: 153936-157019 Capsella grandiflora
Cagra.0596s0033 1.0kb upstream 1.0kb upstream 1000 false Scaffold596: 156020-157019 Capsella grandiflora
Cagra.0596s0033 1.0kb downstream 1.0kb downstream 3084 true Scaffold596: 152936-156019 Capsella grandiflora
Cagra.0596s0033 1.0kb downstream 1.0kb downstream 1000 false Scaffold596: 152936-153935 Capsella grandiflora
Cagra.0596s0033 2.0kb upstream 2.0kb upstream 4084 true Scaffold596: 153936-158019 Capsella grandiflora
Cagra.0596s0033 2.0kb upstream 2.0kb upstream 2000 false Scaffold596: 156020-158019 Capsella grandiflora
Cagra.0596s0033 2.0kb downstream 2.0kb downstream 4084 true Scaffold596: 151936-156019 Capsella grandiflora
Cagra.0596s0033 2.0kb downstream 2.0kb downstream 2000 false Scaffold596: 151936-153935 Capsella grandiflora
Cagra.0596s0033 5.0kb upstream 5.0kb upstream 7084 true Scaffold596: 153936-161019 Capsella grandiflora
Cagra.0596s0033 5.0kb upstream 5.0kb upstream 5000 false Scaffold596: 156020-161019 Capsella grandiflora
Cagra.0596s0033 5.0kb downstream 5.0kb downstream 7084 true Scaffold596: 148936-156019 Capsella grandiflora
Cagra.0596s0033 5.0kb downstream 5.0kb downstream 5000 false Scaffold596: 148936-153935 Capsella grandiflora
Cagra.0596s0033 10.0kb upstream 10.0kb upstream 12084 true Scaffold596: 153936-166019 Capsella grandiflora
Cagra.0596s0033 10.0kb upstream 10.0kb upstream 10000 false Scaffold596: 156020-166019 Capsella grandiflora
Cagra.0596s0033 10.0kb downstream 10.0kb downstream 12084 true Scaffold596: 143936-156019 Capsella grandiflora
Cagra.0596s0033 10.0kb downstream 10.0kb downstream 10000 false Scaffold596: 143936-153935 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368330 5261 Brassicaceae View MSA
123835137 5264 Brassicales-Malvales View MSA
124347934 5266 SBM View MSA
124250960 5268 Malvidae View MSA
124070196 5270 Rosid View MSA
123743313 5271 Pentapetalae View MSA
122789519 5272 Eudicot View MSA
122049860 5273 Angiosperm View MSA
121345913 5274 Embryophyte View MSA
123424462 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain