Gene : Cagra.0578s0050 C. grandiflora v1.1
Defline:  (1 of 3) 1.14.13.39 - Nitric-oxide synthase (NADPH) / NO synthase Genomic Order:  50
Name:  ? Cagra.0578s0050 Secondary Identifier:  ? PAC:28898760
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6845 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0050 0.5kb upstream 0.5kb upstream 3188 true Scaffold578: 179657-182844 Capsella grandiflora
Cagra.0578s0050 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 182345-182844 Capsella grandiflora
Cagra.0578s0050 0.5kb downstream 0.5kb downstream 3188 true Scaffold578: 179157-182344 Capsella grandiflora
Cagra.0578s0050 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 179157-179656 Capsella grandiflora
Cagra.0578s0050 1.0kb upstream 1.0kb upstream 3688 true Scaffold578: 179657-183344 Capsella grandiflora
Cagra.0578s0050 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 182345-183344 Capsella grandiflora
Cagra.0578s0050 1.0kb downstream 1.0kb downstream 3688 true Scaffold578: 178657-182344 Capsella grandiflora
Cagra.0578s0050 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 178657-179656 Capsella grandiflora
Cagra.0578s0050 2.0kb upstream 2.0kb upstream 4688 true Scaffold578: 179657-184344 Capsella grandiflora
Cagra.0578s0050 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 182345-184344 Capsella grandiflora
Cagra.0578s0050 2.0kb downstream 2.0kb downstream 4688 true Scaffold578: 177657-182344 Capsella grandiflora
Cagra.0578s0050 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 177657-179656 Capsella grandiflora
Cagra.0578s0050 5.0kb upstream 5.0kb upstream 7688 true Scaffold578: 179657-187344 Capsella grandiflora
Cagra.0578s0050 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 182345-187344 Capsella grandiflora
Cagra.0578s0050 5.0kb downstream 5.0kb downstream 7688 true Scaffold578: 174657-182344 Capsella grandiflora
Cagra.0578s0050 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 174657-179656 Capsella grandiflora
Cagra.0578s0050 10.0kb upstream 10.0kb upstream 12688 true Scaffold578: 179657-192344 Capsella grandiflora
Cagra.0578s0050 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 182345-192344 Capsella grandiflora
Cagra.0578s0050 10.0kb downstream 10.0kb downstream 12688 true Scaffold578: 169657-182344 Capsella grandiflora
Cagra.0578s0050 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 169657-179656 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373228 5261 Brassicaceae View MSA
123828805 5264 Brassicales-Malvales View MSA
124342889 5266 SBM View MSA
124239066 5268 Malvidae View MSA
124068202 5270 Rosid View MSA
123737776 5271 Pentapetalae View MSA
122786234 5272 Eudicot View MSA
122044948 5273 Angiosperm View MSA
121347878 5274 Embryophyte View MSA
123426230 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain