Gene : Cagra.0578s0060 C. grandiflora v1.1
Defline:  (1 of 4) PTHR32227:SF49 - BETA-1,3-GLUCANASE 1-RELATED Genomic Order:  60
Name:  ? Cagra.0578s0060 Secondary Identifier:  ? PAC:28898678
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0578s0060 0.5kb upstream 0.5kb upstream 2167 true Scaffold578: 218513-220679 Capsella grandiflora
Cagra.0578s0060 0.5kb upstream 0.5kb upstream 500 false Scaffold578: 220180-220679 Capsella grandiflora
Cagra.0578s0060 0.5kb downstream 0.5kb downstream 2167 true Scaffold578: 218013-220179 Capsella grandiflora
Cagra.0578s0060 0.5kb downstream 0.5kb downstream 500 false Scaffold578: 218013-218512 Capsella grandiflora
Cagra.0578s0060 1.0kb upstream 1.0kb upstream 2667 true Scaffold578: 218513-221179 Capsella grandiflora
Cagra.0578s0060 1.0kb upstream 1.0kb upstream 1000 false Scaffold578: 220180-221179 Capsella grandiflora
Cagra.0578s0060 1.0kb downstream 1.0kb downstream 2667 true Scaffold578: 217513-220179 Capsella grandiflora
Cagra.0578s0060 1.0kb downstream 1.0kb downstream 1000 false Scaffold578: 217513-218512 Capsella grandiflora
Cagra.0578s0060 2.0kb upstream 2.0kb upstream 3667 true Scaffold578: 218513-222179 Capsella grandiflora
Cagra.0578s0060 2.0kb upstream 2.0kb upstream 2000 false Scaffold578: 220180-222179 Capsella grandiflora
Cagra.0578s0060 2.0kb downstream 2.0kb downstream 3667 true Scaffold578: 216513-220179 Capsella grandiflora
Cagra.0578s0060 2.0kb downstream 2.0kb downstream 2000 false Scaffold578: 216513-218512 Capsella grandiflora
Cagra.0578s0060 5.0kb upstream 5.0kb upstream 6667 true Scaffold578: 218513-225179 Capsella grandiflora
Cagra.0578s0060 5.0kb upstream 5.0kb upstream 5000 false Scaffold578: 220180-225179 Capsella grandiflora
Cagra.0578s0060 5.0kb downstream 5.0kb downstream 6667 true Scaffold578: 213513-220179 Capsella grandiflora
Cagra.0578s0060 5.0kb downstream 5.0kb downstream 5000 false Scaffold578: 213513-218512 Capsella grandiflora
Cagra.0578s0060 10.0kb upstream 10.0kb upstream 11667 true Scaffold578: 218513-230179 Capsella grandiflora
Cagra.0578s0060 10.0kb upstream 10.0kb upstream 10000 false Scaffold578: 220180-230179 Capsella grandiflora
Cagra.0578s0060 10.0kb downstream 10.0kb downstream 11667 true Scaffold578: 208513-220179 Capsella grandiflora
Cagra.0578s0060 10.0kb downstream 10.0kb downstream 10000 false Scaffold578: 208513-218512 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375569 5261 Brassicaceae View MSA
123835945 5264 Brassicales-Malvales View MSA
124347459 5266 SBM View MSA
124248402 5268 Malvidae View MSA
124073556 5270 Rosid View MSA
123753144 5271 Pentapetalae View MSA
122796626 5272 Eudicot View MSA
122051222 5273 Angiosperm View MSA
121351779 5274 Embryophyte View MSA
123382322 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain