Gene : Cagra.0568s0231 C. grandiflora v1.1
Defline:  (1 of 2) PF00652 - Ricin-type beta-trefoil lectin domain (Ricin_B_lectin) Genomic Order:  231
Name:  ? Cagra.0568s0231 Secondary Identifier:  ? PAC:28910982
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0568s0231 0.5kb upstream 0.5kb upstream 3955 true Scaffold568: 781633-785587 Capsella grandiflora
Cagra.0568s0231 0.5kb upstream 0.5kb upstream 500 false Scaffold568: 781633-782132 Capsella grandiflora
Cagra.0568s0231 0.5kb downstream 0.5kb downstream 3955 true Scaffold568: 782133-786087 Capsella grandiflora
Cagra.0568s0231 0.5kb downstream 0.5kb downstream 500 false Scaffold568: 785588-786087 Capsella grandiflora
Cagra.0568s0231 1.0kb upstream 1.0kb upstream 4455 true Scaffold568: 781133-785587 Capsella grandiflora
Cagra.0568s0231 1.0kb upstream 1.0kb upstream 1000 false Scaffold568: 781133-782132 Capsella grandiflora
Cagra.0568s0231 1.0kb downstream 1.0kb downstream 4455 true Scaffold568: 782133-786587 Capsella grandiflora
Cagra.0568s0231 1.0kb downstream 1.0kb downstream 1000 false Scaffold568: 785588-786587 Capsella grandiflora
Cagra.0568s0231 2.0kb upstream 2.0kb upstream 5455 true Scaffold568: 780133-785587 Capsella grandiflora
Cagra.0568s0231 2.0kb upstream 2.0kb upstream 2000 false Scaffold568: 780133-782132 Capsella grandiflora
Cagra.0568s0231 2.0kb downstream 2.0kb downstream 5455 true Scaffold568: 782133-787587 Capsella grandiflora
Cagra.0568s0231 2.0kb downstream 2.0kb downstream 2000 false Scaffold568: 785588-787587 Capsella grandiflora
Cagra.0568s0231 5.0kb upstream 5.0kb upstream 8455 true Scaffold568: 777133-785587 Capsella grandiflora
Cagra.0568s0231 5.0kb upstream 5.0kb upstream 5000 false Scaffold568: 777133-782132 Capsella grandiflora
Cagra.0568s0231 5.0kb downstream 5.0kb downstream 8455 true Scaffold568: 782133-790587 Capsella grandiflora
Cagra.0568s0231 5.0kb downstream 5.0kb downstream 5000 false Scaffold568: 785588-790587 Capsella grandiflora
Cagra.0568s0231 10.0kb upstream 10.0kb upstream 13455 true Scaffold568: 772133-785587 Capsella grandiflora
Cagra.0568s0231 10.0kb upstream 10.0kb upstream 10000 false Scaffold568: 772133-782132 Capsella grandiflora
Cagra.0568s0231 10.0kb downstream 10.0kb downstream 13455 true Scaffold568: 782133-795587 Capsella grandiflora
Cagra.0568s0231 10.0kb downstream 10.0kb downstream 10000 false Scaffold568: 785588-795587 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027175 5273 Angiosperm View MSA
122365192 5261 Brassicaceae View MSA
123829222 5264 Brassicales-Malvales View MSA
124342554 5266 SBM View MSA
124250410 5268 Malvidae View MSA
124061714 5270 Rosid View MSA
123740079 5271 Pentapetalae View MSA
122789324 5272 Eudicot View MSA
121351116 5274 Embryophyte View MSA
123426514 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain