Gene : Cagra.0569s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR22792:SF58 - LA-RELATED PROTEIN 6A Genomic Order:  1
Name:  ? Cagra.0569s0001 Secondary Identifier:  ? PAC:28894989
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0569s0001 0.5kb upstream 0.5kb upstream 3533 true Scaffold569: 2145-5677 Capsella grandiflora
Cagra.0569s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold569: 2145-2644 Capsella grandiflora
Cagra.0569s0001 0.5kb downstream 0.5kb downstream 3533 true Scaffold569: 2645-6177 Capsella grandiflora
Cagra.0569s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold569: 5678-6177 Capsella grandiflora
Cagra.0569s0001 1.0kb upstream 1.0kb upstream 4033 true Scaffold569: 1645-5677 Capsella grandiflora
Cagra.0569s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold569: 1645-2644 Capsella grandiflora
Cagra.0569s0001 1.0kb downstream 1.0kb downstream 4033 true Scaffold569: 2645-6677 Capsella grandiflora
Cagra.0569s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold569: 5678-6677 Capsella grandiflora
Cagra.0569s0001 2.0kb upstream 2.0kb upstream 5033 true Scaffold569: 645-5677 Capsella grandiflora
Cagra.0569s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold569: 645-2644 Capsella grandiflora
Cagra.0569s0001 2.0kb downstream 2.0kb downstream 5033 true Scaffold569: 2645-7677 Capsella grandiflora
Cagra.0569s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold569: 5678-7677 Capsella grandiflora
Cagra.0569s0001 5.0kb upstream 5.0kb upstream 5677 true Scaffold569: 1-5677 Capsella grandiflora
Cagra.0569s0001 5.0kb upstream 5.0kb upstream 2644 false Scaffold569: 1-2644 Capsella grandiflora
Cagra.0569s0001 5.0kb downstream 5.0kb downstream 8033 true Scaffold569: 2645-10677 Capsella grandiflora
Cagra.0569s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold569: 5678-10677 Capsella grandiflora
Cagra.0569s0001 10.0kb upstream 10.0kb upstream 5677 true Scaffold569: 1-5677 Capsella grandiflora
Cagra.0569s0001 10.0kb upstream 10.0kb upstream 2644 false Scaffold569: 1-2644 Capsella grandiflora
Cagra.0569s0001 10.0kb downstream 10.0kb downstream 13033 true Scaffold569: 2645-15677 Capsella grandiflora
Cagra.0569s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold569: 5678-15677 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373275 5261 Brassicaceae View MSA
123830509 5264 Brassicales-Malvales View MSA
124342126 5266 SBM View MSA
124250640 5268 Malvidae View MSA
124063245 5270 Rosid View MSA
123739352 5271 Pentapetalae View MSA
122791823 5272 Eudicot View MSA
122043814 5273 Angiosperm View MSA
121349510 5274 Embryophyte View MSA
123427383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain