Gene : Cagra.0569s0027 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22880:SF153 - TRANSCRIPTION FACTOR GTE11-RELATED Genomic Order:  27
Name:  ? Cagra.0569s0027 Secondary Identifier:  ? PAC:28894966
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0569s0027 0.5kb upstream 0.5kb upstream 3006 true Scaffold569: 119509-122514 Capsella grandiflora
Cagra.0569s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold569: 122015-122514 Capsella grandiflora
Cagra.0569s0027 0.5kb downstream 0.5kb downstream 3006 true Scaffold569: 119009-122014 Capsella grandiflora
Cagra.0569s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold569: 119009-119508 Capsella grandiflora
Cagra.0569s0027 1.0kb upstream 1.0kb upstream 3506 true Scaffold569: 119509-123014 Capsella grandiflora
Cagra.0569s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold569: 122015-123014 Capsella grandiflora
Cagra.0569s0027 1.0kb downstream 1.0kb downstream 3506 true Scaffold569: 118509-122014 Capsella grandiflora
Cagra.0569s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold569: 118509-119508 Capsella grandiflora
Cagra.0569s0027 2.0kb upstream 2.0kb upstream 4506 true Scaffold569: 119509-124014 Capsella grandiflora
Cagra.0569s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold569: 122015-124014 Capsella grandiflora
Cagra.0569s0027 2.0kb downstream 2.0kb downstream 4506 true Scaffold569: 117509-122014 Capsella grandiflora
Cagra.0569s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold569: 117509-119508 Capsella grandiflora
Cagra.0569s0027 5.0kb upstream 5.0kb upstream 7506 true Scaffold569: 119509-127014 Capsella grandiflora
Cagra.0569s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold569: 122015-127014 Capsella grandiflora
Cagra.0569s0027 5.0kb downstream 5.0kb downstream 7506 true Scaffold569: 114509-122014 Capsella grandiflora
Cagra.0569s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold569: 114509-119508 Capsella grandiflora
Cagra.0569s0027 10.0kb upstream 10.0kb upstream 12506 true Scaffold569: 119509-132014 Capsella grandiflora
Cagra.0569s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold569: 122015-132014 Capsella grandiflora
Cagra.0569s0027 10.0kb downstream 10.0kb downstream 12506 true Scaffold569: 109509-122014 Capsella grandiflora
Cagra.0569s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold569: 109509-119508 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360772 5261 Brassicaceae View MSA
123840539 5264 Brassicales-Malvales View MSA
124342740 5266 SBM View MSA
124242465 5268 Malvidae View MSA
124060921 5270 Rosid View MSA
123751846 5271 Pentapetalae View MSA
122796315 5272 Eudicot View MSA
122048835 5273 Angiosperm View MSA
123429103 5275 Viridiplantae View MSA
121311132 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain