Gene : Cagra.0569s0030 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31989:SF51 - F5D14.30 PROTEIN-RELATED Genomic Order:  30
Name:  ? Cagra.0569s0030 Secondary Identifier:  ? PAC:28894970
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0569s0030 0.5kb upstream 0.5kb upstream 1648 true Scaffold569: 145064-146711 Capsella grandiflora
Cagra.0569s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold569: 145064-145563 Capsella grandiflora
Cagra.0569s0030 0.5kb downstream 0.5kb downstream 1648 true Scaffold569: 145564-147211 Capsella grandiflora
Cagra.0569s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold569: 146712-147211 Capsella grandiflora
Cagra.0569s0030 1.0kb upstream 1.0kb upstream 2148 true Scaffold569: 144564-146711 Capsella grandiflora
Cagra.0569s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold569: 144564-145563 Capsella grandiflora
Cagra.0569s0030 1.0kb downstream 1.0kb downstream 2148 true Scaffold569: 145564-147711 Capsella grandiflora
Cagra.0569s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold569: 146712-147711 Capsella grandiflora
Cagra.0569s0030 2.0kb upstream 2.0kb upstream 3148 true Scaffold569: 143564-146711 Capsella grandiflora
Cagra.0569s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold569: 143564-145563 Capsella grandiflora
Cagra.0569s0030 2.0kb downstream 2.0kb downstream 3148 true Scaffold569: 145564-148711 Capsella grandiflora
Cagra.0569s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold569: 146712-148711 Capsella grandiflora
Cagra.0569s0030 5.0kb upstream 5.0kb upstream 6148 true Scaffold569: 140564-146711 Capsella grandiflora
Cagra.0569s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold569: 140564-145563 Capsella grandiflora
Cagra.0569s0030 5.0kb downstream 5.0kb downstream 6148 true Scaffold569: 145564-151711 Capsella grandiflora
Cagra.0569s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold569: 146712-151711 Capsella grandiflora
Cagra.0569s0030 10.0kb upstream 10.0kb upstream 11148 true Scaffold569: 135564-146711 Capsella grandiflora
Cagra.0569s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold569: 135564-145563 Capsella grandiflora
Cagra.0569s0030 10.0kb downstream 10.0kb downstream 11148 true Scaffold569: 145564-156711 Capsella grandiflora
Cagra.0569s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold569: 146712-156711 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365141 5261 Brassicaceae View MSA
123837975 5264 Brassicales-Malvales View MSA
124336798 5266 SBM View MSA
124253280 5268 Malvidae View MSA
124063603 5270 Rosid View MSA
123753355 5271 Pentapetalae View MSA
122797864 5272 Eudicot View MSA
122051475 5273 Angiosperm View MSA
121312510 5274 Embryophyte View MSA
123349677 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain