Gene : Cagra.0570s0008 C. grandiflora v1.1
Defline:  (1 of 1) KOG0964//KOG0995 - Structural maintenance of chromosome protein 3 (sister chromatid cohesion complex Cohesin, subunit SMC3) // Centromere-associated protein HEC1 Genomic Order:  8
Name:  ? Cagra.0570s0008 Secondary Identifier:  ? PAC:28903575
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0570s0008 0.5kb upstream 0.5kb upstream 5324 true Scaffold570: 31711-37034 Capsella grandiflora
Cagra.0570s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold570: 31711-32210 Capsella grandiflora
Cagra.0570s0008 0.5kb downstream 0.5kb downstream 5324 true Scaffold570: 32211-37534 Capsella grandiflora
Cagra.0570s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold570: 37035-37534 Capsella grandiflora
Cagra.0570s0008 1.0kb upstream 1.0kb upstream 5824 true Scaffold570: 31211-37034 Capsella grandiflora
Cagra.0570s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold570: 31211-32210 Capsella grandiflora
Cagra.0570s0008 1.0kb downstream 1.0kb downstream 5824 true Scaffold570: 32211-38034 Capsella grandiflora
Cagra.0570s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold570: 37035-38034 Capsella grandiflora
Cagra.0570s0008 2.0kb upstream 2.0kb upstream 6824 true Scaffold570: 30211-37034 Capsella grandiflora
Cagra.0570s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold570: 30211-32210 Capsella grandiflora
Cagra.0570s0008 2.0kb downstream 2.0kb downstream 6824 true Scaffold570: 32211-39034 Capsella grandiflora
Cagra.0570s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold570: 37035-39034 Capsella grandiflora
Cagra.0570s0008 5.0kb upstream 5.0kb upstream 9824 true Scaffold570: 27211-37034 Capsella grandiflora
Cagra.0570s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold570: 27211-32210 Capsella grandiflora
Cagra.0570s0008 5.0kb downstream 5.0kb downstream 9824 true Scaffold570: 32211-42034 Capsella grandiflora
Cagra.0570s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold570: 37035-42034 Capsella grandiflora
Cagra.0570s0008 10.0kb upstream 10.0kb upstream 14824 true Scaffold570: 22211-37034 Capsella grandiflora
Cagra.0570s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold570: 22211-32210 Capsella grandiflora
Cagra.0570s0008 10.0kb downstream 10.0kb downstream 14824 true Scaffold570: 32211-47034 Capsella grandiflora
Cagra.0570s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold570: 37035-47034 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375510 5261 Brassicaceae View MSA
123800977 5264 Brassicales-Malvales View MSA
124298327 5266 SBM View MSA
124149992 5268 Malvidae View MSA
123875693 5270 Rosid View MSA
123751003 5271 Pentapetalae View MSA
122791689 5272 Eudicot View MSA
122044031 5273 Angiosperm View MSA
121351485 5274 Embryophyte View MSA
123382184 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain