Gene : Cagra.0799s0004 C. grandiflora v1.1
Defline:  (1 of 1) 2.1.3.3 - Ornithine carbamoyltransferase / OTCase Genomic Order:  4
Name:  ? Cagra.0799s0004 Secondary Identifier:  ? PAC:28899074
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Sequence Feature Displayer

Ontology Annotation Displayer

5 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ARGSYNBSUB-PWY Capsella grandiflora pathologic  
Cgrandiflora ARGSYN-PWY Capsella grandiflora pathologic  
Cgrandiflora CITRULBIO-PWY Capsella grandiflora pathologic  
Cgrandiflora CITRULLINE-DEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-4984 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0004 0.5kb upstream 0.5kb upstream 2732 true Scaffold799: 14666-17397 Capsella grandiflora
Cagra.0799s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 16898-17397 Capsella grandiflora
Cagra.0799s0004 0.5kb downstream 0.5kb downstream 2732 true Scaffold799: 14166-16897 Capsella grandiflora
Cagra.0799s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 14166-14665 Capsella grandiflora
Cagra.0799s0004 1.0kb upstream 1.0kb upstream 3232 true Scaffold799: 14666-17897 Capsella grandiflora
Cagra.0799s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 16898-17897 Capsella grandiflora
Cagra.0799s0004 1.0kb downstream 1.0kb downstream 3232 true Scaffold799: 13666-16897 Capsella grandiflora
Cagra.0799s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 13666-14665 Capsella grandiflora
Cagra.0799s0004 2.0kb upstream 2.0kb upstream 4232 true Scaffold799: 14666-18897 Capsella grandiflora
Cagra.0799s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 16898-18897 Capsella grandiflora
Cagra.0799s0004 2.0kb downstream 2.0kb downstream 4232 true Scaffold799: 12666-16897 Capsella grandiflora
Cagra.0799s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 12666-14665 Capsella grandiflora
Cagra.0799s0004 5.0kb upstream 5.0kb upstream 7232 true Scaffold799: 14666-21897 Capsella grandiflora
Cagra.0799s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 16898-21897 Capsella grandiflora
Cagra.0799s0004 5.0kb downstream 5.0kb downstream 7232 true Scaffold799: 9666-16897 Capsella grandiflora
Cagra.0799s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 9666-14665 Capsella grandiflora
Cagra.0799s0004 10.0kb upstream 10.0kb upstream 12232 true Scaffold799: 14666-26897 Capsella grandiflora
Cagra.0799s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 16898-26897 Capsella grandiflora
Cagra.0799s0004 10.0kb downstream 10.0kb downstream 12232 true Scaffold799: 4666-16897 Capsella grandiflora
Cagra.0799s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 4666-14665 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365362 5261 Brassicaceae View MSA
123830074 5264 Brassicales-Malvales View MSA
124343183 5266 SBM View MSA
124239745 5268 Malvidae View MSA
124068629 5270 Rosid View MSA
123736976 5271 Pentapetalae View MSA
122787582 5272 Eudicot View MSA
122042632 5273 Angiosperm View MSA
121351468 5274 Embryophyte View MSA
123427161 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain