Gene : Cagra.0799s0010 C. grandiflora v1.1
Defline:  (1 of 2) PTHR15160:SF3 - BIFUNCTIONAL NUCLEASE 1-RELATED Genomic Order:  10
Name:  ? Cagra.0799s0010 Secondary Identifier:  ? PAC:28899086
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0010 0.5kb upstream 0.5kb upstream 2308 true Scaffold799: 30771-33078 Capsella grandiflora
Cagra.0799s0010 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 32579-33078 Capsella grandiflora
Cagra.0799s0010 0.5kb downstream 0.5kb downstream 2308 true Scaffold799: 30271-32578 Capsella grandiflora
Cagra.0799s0010 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 30271-30770 Capsella grandiflora
Cagra.0799s0010 1.0kb upstream 1.0kb upstream 2808 true Scaffold799: 30771-33578 Capsella grandiflora
Cagra.0799s0010 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 32579-33578 Capsella grandiflora
Cagra.0799s0010 1.0kb downstream 1.0kb downstream 2808 true Scaffold799: 29771-32578 Capsella grandiflora
Cagra.0799s0010 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 29771-30770 Capsella grandiflora
Cagra.0799s0010 2.0kb upstream 2.0kb upstream 3808 true Scaffold799: 30771-34578 Capsella grandiflora
Cagra.0799s0010 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 32579-34578 Capsella grandiflora
Cagra.0799s0010 2.0kb downstream 2.0kb downstream 3808 true Scaffold799: 28771-32578 Capsella grandiflora
Cagra.0799s0010 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 28771-30770 Capsella grandiflora
Cagra.0799s0010 5.0kb upstream 5.0kb upstream 6808 true Scaffold799: 30771-37578 Capsella grandiflora
Cagra.0799s0010 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 32579-37578 Capsella grandiflora
Cagra.0799s0010 5.0kb downstream 5.0kb downstream 6808 true Scaffold799: 25771-32578 Capsella grandiflora
Cagra.0799s0010 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 25771-30770 Capsella grandiflora
Cagra.0799s0010 10.0kb upstream 10.0kb upstream 11808 true Scaffold799: 30771-42578 Capsella grandiflora
Cagra.0799s0010 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 32579-42578 Capsella grandiflora
Cagra.0799s0010 10.0kb downstream 10.0kb downstream 11808 true Scaffold799: 20771-32578 Capsella grandiflora
Cagra.0799s0010 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 20771-30770 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380470 5261 Brassicaceae View MSA
123833088 5264 Brassicales-Malvales View MSA
124345202 5266 SBM View MSA
124242607 5268 Malvidae View MSA
124063334 5270 Rosid View MSA
123751879 5271 Pentapetalae View MSA
122794039 5272 Eudicot View MSA
122042536 5273 Angiosperm View MSA
121348555 5274 Embryophyte View MSA
123425976 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain