Gene : Cagra.0799s0020 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13878:SF60 - CYTOKININ DEHYDROGENASE 5 Genomic Order:  20
Name:  ? Cagra.0799s0020 Secondary Identifier:  ? PAC:28899121
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0020 0.5kb upstream 0.5kb upstream 3642 true Scaffold799: 67195-70836 Capsella grandiflora
Cagra.0799s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 70337-70836 Capsella grandiflora
Cagra.0799s0020 0.5kb downstream 0.5kb downstream 3642 true Scaffold799: 66695-70336 Capsella grandiflora
Cagra.0799s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 66695-67194 Capsella grandiflora
Cagra.0799s0020 1.0kb upstream 1.0kb upstream 4142 true Scaffold799: 67195-71336 Capsella grandiflora
Cagra.0799s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 70337-71336 Capsella grandiflora
Cagra.0799s0020 1.0kb downstream 1.0kb downstream 4142 true Scaffold799: 66195-70336 Capsella grandiflora
Cagra.0799s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 66195-67194 Capsella grandiflora
Cagra.0799s0020 2.0kb upstream 2.0kb upstream 5142 true Scaffold799: 67195-72336 Capsella grandiflora
Cagra.0799s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 70337-72336 Capsella grandiflora
Cagra.0799s0020 2.0kb downstream 2.0kb downstream 5142 true Scaffold799: 65195-70336 Capsella grandiflora
Cagra.0799s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 65195-67194 Capsella grandiflora
Cagra.0799s0020 5.0kb upstream 5.0kb upstream 8142 true Scaffold799: 67195-75336 Capsella grandiflora
Cagra.0799s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 70337-75336 Capsella grandiflora
Cagra.0799s0020 5.0kb downstream 5.0kb downstream 8142 true Scaffold799: 62195-70336 Capsella grandiflora
Cagra.0799s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 62195-67194 Capsella grandiflora
Cagra.0799s0020 10.0kb upstream 10.0kb upstream 13142 true Scaffold799: 67195-80336 Capsella grandiflora
Cagra.0799s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 70337-80336 Capsella grandiflora
Cagra.0799s0020 10.0kb downstream 10.0kb downstream 13142 true Scaffold799: 57195-70336 Capsella grandiflora
Cagra.0799s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 57195-67194 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366809 5261 Brassicaceae View MSA
123834192 5264 Brassicales-Malvales View MSA
124343232 5266 SBM View MSA
124253312 5268 Malvidae View MSA
124065162 5270 Rosid View MSA
123739641 5271 Pentapetalae View MSA
122791542 5272 Eudicot View MSA
122043536 5273 Angiosperm View MSA
121348628 5274 Embryophyte View MSA
123380946 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain