Gene : Cagra.0799s0025 C. grandiflora v1.1
Defline:  (1 of 5) PTHR31604:SF3 - PROTEIN SHI RELATED SEQUENCE 1-RELATED Genomic Order:  25
Name:  ? Cagra.0799s0025 Secondary Identifier:  ? PAC:28899044
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0025 0.5kb upstream 0.5kb upstream 1888 true Scaffold799: 100045-101932 Capsella grandiflora
Cagra.0799s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 101433-101932 Capsella grandiflora
Cagra.0799s0025 0.5kb downstream 0.5kb downstream 1888 true Scaffold799: 99545-101432 Capsella grandiflora
Cagra.0799s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 99545-100044 Capsella grandiflora
Cagra.0799s0025 1.0kb upstream 1.0kb upstream 2388 true Scaffold799: 100045-102432 Capsella grandiflora
Cagra.0799s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 101433-102432 Capsella grandiflora
Cagra.0799s0025 1.0kb downstream 1.0kb downstream 2388 true Scaffold799: 99045-101432 Capsella grandiflora
Cagra.0799s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 99045-100044 Capsella grandiflora
Cagra.0799s0025 2.0kb upstream 2.0kb upstream 3388 true Scaffold799: 100045-103432 Capsella grandiflora
Cagra.0799s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 101433-103432 Capsella grandiflora
Cagra.0799s0025 2.0kb downstream 2.0kb downstream 3388 true Scaffold799: 98045-101432 Capsella grandiflora
Cagra.0799s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 98045-100044 Capsella grandiflora
Cagra.0799s0025 5.0kb upstream 5.0kb upstream 6388 true Scaffold799: 100045-106432 Capsella grandiflora
Cagra.0799s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 101433-106432 Capsella grandiflora
Cagra.0799s0025 5.0kb downstream 5.0kb downstream 6388 true Scaffold799: 95045-101432 Capsella grandiflora
Cagra.0799s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 95045-100044 Capsella grandiflora
Cagra.0799s0025 10.0kb upstream 10.0kb upstream 11388 true Scaffold799: 100045-111432 Capsella grandiflora
Cagra.0799s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 101433-111432 Capsella grandiflora
Cagra.0799s0025 10.0kb downstream 10.0kb downstream 11388 true Scaffold799: 90045-101432 Capsella grandiflora
Cagra.0799s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 90045-100044 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364032 5261 Brassicaceae View MSA
123838633 5264 Brassicales-Malvales View MSA
124340064 5266 SBM View MSA
124251663 5268 Malvidae View MSA
124067577 5270 Rosid View MSA
123749314 5271 Pentapetalae View MSA
122796752 5272 Eudicot View MSA
122049669 5273 Angiosperm View MSA
121344202 5274 Embryophyte View MSA
123379999 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain