Gene : Cagra.0799s0034 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10263:SF13 - V-TYPE PROTON ATPASE 16 KDA PROTEOLIPID SUBUNIT C4 Genomic Order:  34
Name:  ? Cagra.0799s0034 Secondary Identifier:  ? PAC:28899033
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0799s0034 0.5kb upstream 0.5kb upstream 2014 true Scaffold799: 149763-151776 Capsella grandiflora
Cagra.0799s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold799: 149763-150262 Capsella grandiflora
Cagra.0799s0034 0.5kb downstream 0.5kb downstream 2014 true Scaffold799: 150263-152276 Capsella grandiflora
Cagra.0799s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold799: 151777-152276 Capsella grandiflora
Cagra.0799s0034 1.0kb upstream 1.0kb upstream 2514 true Scaffold799: 149263-151776 Capsella grandiflora
Cagra.0799s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold799: 149263-150262 Capsella grandiflora
Cagra.0799s0034 1.0kb downstream 1.0kb downstream 2514 true Scaffold799: 150263-152776 Capsella grandiflora
Cagra.0799s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold799: 151777-152776 Capsella grandiflora
Cagra.0799s0034 2.0kb upstream 2.0kb upstream 3514 true Scaffold799: 148263-151776 Capsella grandiflora
Cagra.0799s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold799: 148263-150262 Capsella grandiflora
Cagra.0799s0034 2.0kb downstream 2.0kb downstream 3514 true Scaffold799: 150263-153776 Capsella grandiflora
Cagra.0799s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold799: 151777-153776 Capsella grandiflora
Cagra.0799s0034 5.0kb upstream 5.0kb upstream 6514 true Scaffold799: 145263-151776 Capsella grandiflora
Cagra.0799s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold799: 145263-150262 Capsella grandiflora
Cagra.0799s0034 5.0kb downstream 5.0kb downstream 6514 true Scaffold799: 150263-156776 Capsella grandiflora
Cagra.0799s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold799: 151777-156776 Capsella grandiflora
Cagra.0799s0034 10.0kb upstream 10.0kb upstream 11514 true Scaffold799: 140263-151776 Capsella grandiflora
Cagra.0799s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold799: 140263-150262 Capsella grandiflora
Cagra.0799s0034 10.0kb downstream 10.0kb downstream 11514 true Scaffold799: 150263-161776 Capsella grandiflora
Cagra.0799s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold799: 151777-161776 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379842 5261 Brassicaceae View MSA
123840555 5264 Brassicales-Malvales View MSA
124343812 5266 SBM View MSA
124250754 5268 Malvidae View MSA
124071141 5270 Rosid View MSA
123751721 5271 Pentapetalae View MSA
122796043 5272 Eudicot View MSA
122048360 5273 Angiosperm View MSA
121348011 5274 Embryophyte View MSA
123424193 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain