Gene : Cagra.0802s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12736//PTHR12736:SF13 - LANC-LIKE PROTEIN Genomic Order:  2
Name:  ? Cagra.0802s0002 Secondary Identifier:  ? PAC:28895830
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0802s0002 0.5kb upstream 0.5kb upstream 2384 true Scaffold802: 2107-4490 Capsella grandiflora
Cagra.0802s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold802: 3991-4490 Capsella grandiflora
Cagra.0802s0002 0.5kb downstream 0.5kb downstream 2384 true Scaffold802: 1607-3990 Capsella grandiflora
Cagra.0802s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold802: 1607-2106 Capsella grandiflora
Cagra.0802s0002 1.0kb upstream 1.0kb upstream 2884 true Scaffold802: 2107-4990 Capsella grandiflora
Cagra.0802s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold802: 3991-4990 Capsella grandiflora
Cagra.0802s0002 1.0kb downstream 1.0kb downstream 2884 true Scaffold802: 1107-3990 Capsella grandiflora
Cagra.0802s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold802: 1107-2106 Capsella grandiflora
Cagra.0802s0002 2.0kb upstream 2.0kb upstream 3884 true Scaffold802: 2107-5990 Capsella grandiflora
Cagra.0802s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold802: 3991-5990 Capsella grandiflora
Cagra.0802s0002 2.0kb downstream 2.0kb downstream 3884 true Scaffold802: 107-3990 Capsella grandiflora
Cagra.0802s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold802: 107-2106 Capsella grandiflora
Cagra.0802s0002 5.0kb upstream 5.0kb upstream 6884 true Scaffold802: 2107-8990 Capsella grandiflora
Cagra.0802s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold802: 3991-8990 Capsella grandiflora
Cagra.0802s0002 5.0kb downstream 5.0kb downstream 3990 true Scaffold802: 1-3990 Capsella grandiflora
Cagra.0802s0002 5.0kb downstream 5.0kb downstream 2106 false Scaffold802: 1-2106 Capsella grandiflora
Cagra.0802s0002 10.0kb upstream 10.0kb upstream 11884 true Scaffold802: 2107-13990 Capsella grandiflora
Cagra.0802s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold802: 3991-13990 Capsella grandiflora
Cagra.0802s0002 10.0kb downstream 10.0kb downstream 3990 true Scaffold802: 1-3990 Capsella grandiflora
Cagra.0802s0002 10.0kb downstream 10.0kb downstream 2106 false Scaffold802: 1-2106 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122376533 5261 Brassicaceae View MSA
123827996 5264 Brassicales-Malvales View MSA
124321500 5266 SBM View MSA
124240012 5268 Malvidae View MSA
124065113 5270 Rosid View MSA
123737530 5271 Pentapetalae View MSA
122788012 5272 Eudicot View MSA
122042680 5273 Angiosperm View MSA
121348546 5274 Embryophyte View MSA
123425935 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain