Gene : Cagra.0769s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31707:SF55 - PECTINESTERASE 2-RELATED Genomic Order:  1
Name:  ? Cagra.0769s0001 Secondary Identifier:  ? PAC:28912533
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0769s0001 0.5kb upstream 0.5kb upstream 2121 true Scaffold769: 1-2121 Capsella grandiflora
Cagra.0769s0001 0.5kb upstream 0.5kb upstream 8 false Scaffold769: 1-8 Capsella grandiflora
Cagra.0769s0001 0.5kb downstream 0.5kb downstream 2613 true Scaffold769: 9-2621 Capsella grandiflora
Cagra.0769s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold769: 2122-2621 Capsella grandiflora
Cagra.0769s0001 1.0kb upstream 1.0kb upstream 2121 true Scaffold769: 1-2121 Capsella grandiflora
Cagra.0769s0001 1.0kb upstream 1.0kb upstream 8 false Scaffold769: 1-8 Capsella grandiflora
Cagra.0769s0001 1.0kb downstream 1.0kb downstream 3113 true Scaffold769: 9-3121 Capsella grandiflora
Cagra.0769s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold769: 2122-3121 Capsella grandiflora
Cagra.0769s0001 2.0kb upstream 2.0kb upstream 2121 true Scaffold769: 1-2121 Capsella grandiflora
Cagra.0769s0001 2.0kb upstream 2.0kb upstream 8 false Scaffold769: 1-8 Capsella grandiflora
Cagra.0769s0001 2.0kb downstream 2.0kb downstream 4113 true Scaffold769: 9-4121 Capsella grandiflora
Cagra.0769s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold769: 2122-4121 Capsella grandiflora
Cagra.0769s0001 5.0kb upstream 5.0kb upstream 2121 true Scaffold769: 1-2121 Capsella grandiflora
Cagra.0769s0001 5.0kb upstream 5.0kb upstream 8 false Scaffold769: 1-8 Capsella grandiflora
Cagra.0769s0001 5.0kb downstream 5.0kb downstream 7113 true Scaffold769: 9-7121 Capsella grandiflora
Cagra.0769s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold769: 2122-7121 Capsella grandiflora
Cagra.0769s0001 10.0kb upstream 10.0kb upstream 2121 true Scaffold769: 1-2121 Capsella grandiflora
Cagra.0769s0001 10.0kb upstream 10.0kb upstream 8 false Scaffold769: 1-8 Capsella grandiflora
Cagra.0769s0001 10.0kb downstream 10.0kb downstream 12113 true Scaffold769: 9-12121 Capsella grandiflora
Cagra.0769s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold769: 2122-12121 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365332 5261 Brassicaceae View MSA
123841223 5264 Brassicales-Malvales View MSA
124350468 5266 SBM View MSA
124246887 5268 Malvidae View MSA
124060766 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain