Gene : Cagra.0779s0016 C. grandiflora v1.1
Defline:  (1 of 2) PTHR10044//PTHR10044:SF121 - INHIBITOR OF APOPTOSIS Genomic Order:  16
Name:  ? Cagra.0779s0016 Secondary Identifier:  ? PAC:28897418
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-7511 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0779s0016 0.5kb upstream 0.5kb upstream 1708 true Scaffold779: 76577-78284 Capsella grandiflora
Cagra.0779s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold779: 77785-78284 Capsella grandiflora
Cagra.0779s0016 0.5kb downstream 0.5kb downstream 1708 true Scaffold779: 76077-77784 Capsella grandiflora
Cagra.0779s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold779: 76077-76576 Capsella grandiflora
Cagra.0779s0016 1.0kb upstream 1.0kb upstream 2208 true Scaffold779: 76577-78784 Capsella grandiflora
Cagra.0779s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold779: 77785-78784 Capsella grandiflora
Cagra.0779s0016 1.0kb downstream 1.0kb downstream 2208 true Scaffold779: 75577-77784 Capsella grandiflora
Cagra.0779s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold779: 75577-76576 Capsella grandiflora
Cagra.0779s0016 2.0kb upstream 2.0kb upstream 3208 true Scaffold779: 76577-79784 Capsella grandiflora
Cagra.0779s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold779: 77785-79784 Capsella grandiflora
Cagra.0779s0016 2.0kb downstream 2.0kb downstream 3208 true Scaffold779: 74577-77784 Capsella grandiflora
Cagra.0779s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold779: 74577-76576 Capsella grandiflora
Cagra.0779s0016 5.0kb upstream 5.0kb upstream 6208 true Scaffold779: 76577-82784 Capsella grandiflora
Cagra.0779s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold779: 77785-82784 Capsella grandiflora
Cagra.0779s0016 5.0kb downstream 5.0kb downstream 6208 true Scaffold779: 71577-77784 Capsella grandiflora
Cagra.0779s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold779: 71577-76576 Capsella grandiflora
Cagra.0779s0016 10.0kb upstream 10.0kb upstream 11208 true Scaffold779: 76577-87784 Capsella grandiflora
Cagra.0779s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold779: 77785-87784 Capsella grandiflora
Cagra.0779s0016 10.0kb downstream 10.0kb downstream 11208 true Scaffold779: 66577-77784 Capsella grandiflora
Cagra.0779s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold779: 66577-76576 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371704 5261 Brassicaceae View MSA
123837946 5264 Brassicales-Malvales View MSA
124340913 5266 SBM View MSA
124245207 5268 Malvidae View MSA
124063916 5270 Rosid View MSA
123752259 5271 Pentapetalae View MSA
122794971 5272 Eudicot View MSA
122050089 5273 Angiosperm View MSA
121348016 5274 Embryophyte View MSA
123380706 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain