Gene : Cagra.0787s0012 C. grandiflora v1.1
Defline:  (1 of 21) PF00651//PF03000 - BTB/POZ domain (BTB) // NPH3 family (NPH3) Genomic Order:  12
Name:  ? Cagra.0787s0012 Secondary Identifier:  ? PAC:28895298
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0787s0012 0.5kb upstream 0.5kb upstream 2621 true Scaffold787: 64703-67323 Capsella grandiflora
Cagra.0787s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold787: 66824-67323 Capsella grandiflora
Cagra.0787s0012 0.5kb downstream 0.5kb downstream 2621 true Scaffold787: 64203-66823 Capsella grandiflora
Cagra.0787s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold787: 64203-64702 Capsella grandiflora
Cagra.0787s0012 1.0kb upstream 1.0kb upstream 3121 true Scaffold787: 64703-67823 Capsella grandiflora
Cagra.0787s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold787: 66824-67823 Capsella grandiflora
Cagra.0787s0012 1.0kb downstream 1.0kb downstream 3121 true Scaffold787: 63703-66823 Capsella grandiflora
Cagra.0787s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold787: 63703-64702 Capsella grandiflora
Cagra.0787s0012 2.0kb upstream 2.0kb upstream 4121 true Scaffold787: 64703-68823 Capsella grandiflora
Cagra.0787s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold787: 66824-68823 Capsella grandiflora
Cagra.0787s0012 2.0kb downstream 2.0kb downstream 4121 true Scaffold787: 62703-66823 Capsella grandiflora
Cagra.0787s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold787: 62703-64702 Capsella grandiflora
Cagra.0787s0012 5.0kb upstream 5.0kb upstream 7121 true Scaffold787: 64703-71823 Capsella grandiflora
Cagra.0787s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold787: 66824-71823 Capsella grandiflora
Cagra.0787s0012 5.0kb downstream 5.0kb downstream 7121 true Scaffold787: 59703-66823 Capsella grandiflora
Cagra.0787s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold787: 59703-64702 Capsella grandiflora
Cagra.0787s0012 10.0kb upstream 10.0kb upstream 12121 true Scaffold787: 64703-76823 Capsella grandiflora
Cagra.0787s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold787: 66824-76823 Capsella grandiflora
Cagra.0787s0012 10.0kb downstream 10.0kb downstream 12121 true Scaffold787: 54703-66823 Capsella grandiflora
Cagra.0787s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold787: 54703-64702 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366329 5261 Brassicaceae View MSA
123841468 5264 Brassicales-Malvales View MSA
124343033 5266 SBM View MSA
124240767 5268 Malvidae View MSA
124065834 5270 Rosid View MSA
123743822 5271 Pentapetalae View MSA
122789563 5272 Eudicot View MSA
122044004 5273 Angiosperm View MSA
121350656 5274 Embryophyte View MSA
123381839 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain