Gene : Cagra.0787s0015 C. grandiflora v1.1
Defline:  (1 of 1) PF03109//PF11721//PF13855 - ABC1 family (ABC1) // Di-glucose binding within endoplasmic reticulum (Malectin) // Leucine rich repeat (LRR_8) Genomic Order:  15
Name:  ? Cagra.0787s0015 Secondary Identifier:  ? PAC:28895288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0787s0015 0.5kb upstream 0.5kb upstream 5620 true Scaffold787: 83737-89356 Capsella grandiflora
Cagra.0787s0015 0.5kb upstream 0.5kb upstream 500 false Scaffold787: 83737-84236 Capsella grandiflora
Cagra.0787s0015 0.5kb downstream 0.5kb downstream 5620 true Scaffold787: 84237-89856 Capsella grandiflora
Cagra.0787s0015 0.5kb downstream 0.5kb downstream 500 false Scaffold787: 89357-89856 Capsella grandiflora
Cagra.0787s0015 1.0kb upstream 1.0kb upstream 6120 true Scaffold787: 83237-89356 Capsella grandiflora
Cagra.0787s0015 1.0kb upstream 1.0kb upstream 1000 false Scaffold787: 83237-84236 Capsella grandiflora
Cagra.0787s0015 1.0kb downstream 1.0kb downstream 6120 true Scaffold787: 84237-90356 Capsella grandiflora
Cagra.0787s0015 1.0kb downstream 1.0kb downstream 1000 false Scaffold787: 89357-90356 Capsella grandiflora
Cagra.0787s0015 2.0kb upstream 2.0kb upstream 7120 true Scaffold787: 82237-89356 Capsella grandiflora
Cagra.0787s0015 2.0kb upstream 2.0kb upstream 2000 false Scaffold787: 82237-84236 Capsella grandiflora
Cagra.0787s0015 2.0kb downstream 2.0kb downstream 7120 true Scaffold787: 84237-91356 Capsella grandiflora
Cagra.0787s0015 2.0kb downstream 2.0kb downstream 2000 false Scaffold787: 89357-91356 Capsella grandiflora
Cagra.0787s0015 5.0kb upstream 5.0kb upstream 10120 true Scaffold787: 79237-89356 Capsella grandiflora
Cagra.0787s0015 5.0kb upstream 5.0kb upstream 5000 false Scaffold787: 79237-84236 Capsella grandiflora
Cagra.0787s0015 5.0kb downstream 5.0kb downstream 10120 true Scaffold787: 84237-94356 Capsella grandiflora
Cagra.0787s0015 5.0kb downstream 5.0kb downstream 5000 false Scaffold787: 89357-94356 Capsella grandiflora
Cagra.0787s0015 10.0kb upstream 10.0kb upstream 15120 true Scaffold787: 74237-89356 Capsella grandiflora
Cagra.0787s0015 10.0kb upstream 10.0kb upstream 10000 false Scaffold787: 74237-84236 Capsella grandiflora
Cagra.0787s0015 10.0kb downstream 10.0kb downstream 14226 true Scaffold787: 84237-98462 Capsella grandiflora
Cagra.0787s0015 10.0kb downstream 10.0kb downstream 9106 false Scaffold787: 89357-98462 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361061 5261 Brassicaceae View MSA
123831753 5264 Brassicales-Malvales View MSA
124340199 5266 SBM View MSA
124240791 5268 Malvidae View MSA
124066664 5270 Rosid View MSA
123753765 5271 Pentapetalae View MSA
122797900 5272 Eudicot View MSA
122051692 5273 Angiosperm View MSA
123429169 5275 Viridiplantae View MSA
121351748 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain