Gene : Cagra.0751s0027 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12510:SF7 - AIG2-LIKE (AVIRULENCE INDUCED GENE) FAMILY PROTEIN Genomic Order:  27
Name:  ? Cagra.0751s0027 Secondary Identifier:  ? PAC:28899580
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0751s0027 0.5kb upstream 0.5kb upstream 2230 true Scaffold751: 108053-110282 Capsella grandiflora
Cagra.0751s0027 0.5kb upstream 0.5kb upstream 500 false Scaffold751: 109783-110282 Capsella grandiflora
Cagra.0751s0027 0.5kb downstream 0.5kb downstream 2230 true Scaffold751: 107553-109782 Capsella grandiflora
Cagra.0751s0027 0.5kb downstream 0.5kb downstream 500 false Scaffold751: 107553-108052 Capsella grandiflora
Cagra.0751s0027 1.0kb upstream 1.0kb upstream 2730 true Scaffold751: 108053-110782 Capsella grandiflora
Cagra.0751s0027 1.0kb upstream 1.0kb upstream 1000 false Scaffold751: 109783-110782 Capsella grandiflora
Cagra.0751s0027 1.0kb downstream 1.0kb downstream 2730 true Scaffold751: 107053-109782 Capsella grandiflora
Cagra.0751s0027 1.0kb downstream 1.0kb downstream 1000 false Scaffold751: 107053-108052 Capsella grandiflora
Cagra.0751s0027 2.0kb upstream 2.0kb upstream 3730 true Scaffold751: 108053-111782 Capsella grandiflora
Cagra.0751s0027 2.0kb upstream 2.0kb upstream 2000 false Scaffold751: 109783-111782 Capsella grandiflora
Cagra.0751s0027 2.0kb downstream 2.0kb downstream 3730 true Scaffold751: 106053-109782 Capsella grandiflora
Cagra.0751s0027 2.0kb downstream 2.0kb downstream 2000 false Scaffold751: 106053-108052 Capsella grandiflora
Cagra.0751s0027 5.0kb upstream 5.0kb upstream 6730 true Scaffold751: 108053-114782 Capsella grandiflora
Cagra.0751s0027 5.0kb upstream 5.0kb upstream 5000 false Scaffold751: 109783-114782 Capsella grandiflora
Cagra.0751s0027 5.0kb downstream 5.0kb downstream 6730 true Scaffold751: 103053-109782 Capsella grandiflora
Cagra.0751s0027 5.0kb downstream 5.0kb downstream 5000 false Scaffold751: 103053-108052 Capsella grandiflora
Cagra.0751s0027 10.0kb upstream 10.0kb upstream 11730 true Scaffold751: 108053-119782 Capsella grandiflora
Cagra.0751s0027 10.0kb upstream 10.0kb upstream 10000 false Scaffold751: 109783-119782 Capsella grandiflora
Cagra.0751s0027 10.0kb downstream 10.0kb downstream 11730 true Scaffold751: 98053-109782 Capsella grandiflora
Cagra.0751s0027 10.0kb downstream 10.0kb downstream 10000 false Scaffold751: 98053-108052 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363956 5261 Brassicaceae View MSA
123834816 5264 Brassicales-Malvales View MSA
124350847 5266 SBM View MSA
124246677 5268 Malvidae View MSA
124068981 5270 Rosid View MSA
123739827 5271 Pentapetalae View MSA
122789137 5272 Eudicot View MSA
122047462 5273 Angiosperm View MSA
121349435 5274 Embryophyte View MSA
123425179 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain