Gene : Cagra.0753s0008 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31707:SF25 - PECTINESTERASE/PECTINESTERASE INHIBITOR 39-RELATED Genomic Order:  8
Name:  ? Cagra.0753s0008 Secondary Identifier:  ? PAC:28902540
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-1081 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0753s0008 0.5kb upstream 0.5kb upstream 2721 true Scaffold753: 22674-25394 Capsella grandiflora
Cagra.0753s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold753: 22674-23173 Capsella grandiflora
Cagra.0753s0008 0.5kb downstream 0.5kb downstream 2721 true Scaffold753: 23174-25894 Capsella grandiflora
Cagra.0753s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold753: 25395-25894 Capsella grandiflora
Cagra.0753s0008 1.0kb upstream 1.0kb upstream 3221 true Scaffold753: 22174-25394 Capsella grandiflora
Cagra.0753s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold753: 22174-23173 Capsella grandiflora
Cagra.0753s0008 1.0kb downstream 1.0kb downstream 3221 true Scaffold753: 23174-26394 Capsella grandiflora
Cagra.0753s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold753: 25395-26394 Capsella grandiflora
Cagra.0753s0008 2.0kb upstream 2.0kb upstream 4221 true Scaffold753: 21174-25394 Capsella grandiflora
Cagra.0753s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold753: 21174-23173 Capsella grandiflora
Cagra.0753s0008 2.0kb downstream 2.0kb downstream 4221 true Scaffold753: 23174-27394 Capsella grandiflora
Cagra.0753s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold753: 25395-27394 Capsella grandiflora
Cagra.0753s0008 5.0kb upstream 5.0kb upstream 7221 true Scaffold753: 18174-25394 Capsella grandiflora
Cagra.0753s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold753: 18174-23173 Capsella grandiflora
Cagra.0753s0008 5.0kb downstream 5.0kb downstream 7221 true Scaffold753: 23174-30394 Capsella grandiflora
Cagra.0753s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold753: 25395-30394 Capsella grandiflora
Cagra.0753s0008 10.0kb upstream 10.0kb upstream 12221 true Scaffold753: 13174-25394 Capsella grandiflora
Cagra.0753s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold753: 13174-23173 Capsella grandiflora
Cagra.0753s0008 10.0kb downstream 10.0kb downstream 12221 true Scaffold753: 23174-35394 Capsella grandiflora
Cagra.0753s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold753: 25395-35394 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371343 5261 Brassicaceae View MSA
123838203 5264 Brassicales-Malvales View MSA
124343008 5266 SBM View MSA
124253387 5268 Malvidae View MSA
124074194 5270 Rosid View MSA
123741705 5271 Pentapetalae View MSA
122792272 5272 Eudicot View MSA
122051530 5273 Angiosperm View MSA
121350573 5274 Embryophyte View MSA
123381802 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain