Gene : Cagra.0753s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR33470:SF1 - POLLEN OLE E 1 ALLERGEN AND EXTENSIN FAMILY PROTEIN Genomic Order:  11
Name:  ? Cagra.0753s0011 Secondary Identifier:  ? PAC:28902555
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0753s0011 0.5kb upstream 0.5kb upstream 1202 true Scaffold753: 41247-42448 Capsella grandiflora
Cagra.0753s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold753: 41247-41746 Capsella grandiflora
Cagra.0753s0011 0.5kb downstream 0.5kb downstream 1202 true Scaffold753: 41747-42948 Capsella grandiflora
Cagra.0753s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold753: 42449-42948 Capsella grandiflora
Cagra.0753s0011 1.0kb upstream 1.0kb upstream 1702 true Scaffold753: 40747-42448 Capsella grandiflora
Cagra.0753s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold753: 40747-41746 Capsella grandiflora
Cagra.0753s0011 1.0kb downstream 1.0kb downstream 1702 true Scaffold753: 41747-43448 Capsella grandiflora
Cagra.0753s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold753: 42449-43448 Capsella grandiflora
Cagra.0753s0011 2.0kb upstream 2.0kb upstream 2702 true Scaffold753: 39747-42448 Capsella grandiflora
Cagra.0753s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold753: 39747-41746 Capsella grandiflora
Cagra.0753s0011 2.0kb downstream 2.0kb downstream 2702 true Scaffold753: 41747-44448 Capsella grandiflora
Cagra.0753s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold753: 42449-44448 Capsella grandiflora
Cagra.0753s0011 5.0kb upstream 5.0kb upstream 5702 true Scaffold753: 36747-42448 Capsella grandiflora
Cagra.0753s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold753: 36747-41746 Capsella grandiflora
Cagra.0753s0011 5.0kb downstream 5.0kb downstream 5702 true Scaffold753: 41747-47448 Capsella grandiflora
Cagra.0753s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold753: 42449-47448 Capsella grandiflora
Cagra.0753s0011 10.0kb upstream 10.0kb upstream 10702 true Scaffold753: 31747-42448 Capsella grandiflora
Cagra.0753s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold753: 31747-41746 Capsella grandiflora
Cagra.0753s0011 10.0kb downstream 10.0kb downstream 10702 true Scaffold753: 41747-52448 Capsella grandiflora
Cagra.0753s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold753: 42449-52448 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364318 5261 Brassicaceae View MSA
123840198 5264 Brassicales-Malvales View MSA
124350149 5266 SBM View MSA
124237056 5268 Malvidae View MSA
124065912 5270 Rosid View MSA
123753028 5271 Pentapetalae View MSA
122796591 5272 Eudicot View MSA
122051631 5273 Angiosperm View MSA
121349317 5274 Embryophyte View MSA
123381274 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain