Gene : Cagra.0753s0035 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11361:SF89 - DNA MISMATCH REPAIR PROTEIN MSH6 Genomic Order:  35
Name:  ? Cagra.0753s0035 Secondary Identifier:  ? PAC:28902535
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0753s0035 0.5kb upstream 0.5kb upstream 8003 true Scaffold753: 135754-143756 Capsella grandiflora
Cagra.0753s0035 0.5kb upstream 0.5kb upstream 500 false Scaffold753: 143257-143756 Capsella grandiflora
Cagra.0753s0035 0.5kb downstream 0.5kb downstream 8003 true Scaffold753: 135254-143256 Capsella grandiflora
Cagra.0753s0035 0.5kb downstream 0.5kb downstream 500 false Scaffold753: 135254-135753 Capsella grandiflora
Cagra.0753s0035 1.0kb upstream 1.0kb upstream 8503 true Scaffold753: 135754-144256 Capsella grandiflora
Cagra.0753s0035 1.0kb upstream 1.0kb upstream 1000 false Scaffold753: 143257-144256 Capsella grandiflora
Cagra.0753s0035 1.0kb downstream 1.0kb downstream 8503 true Scaffold753: 134754-143256 Capsella grandiflora
Cagra.0753s0035 1.0kb downstream 1.0kb downstream 1000 false Scaffold753: 134754-135753 Capsella grandiflora
Cagra.0753s0035 2.0kb upstream 2.0kb upstream 9503 true Scaffold753: 135754-145256 Capsella grandiflora
Cagra.0753s0035 2.0kb upstream 2.0kb upstream 2000 false Scaffold753: 143257-145256 Capsella grandiflora
Cagra.0753s0035 2.0kb downstream 2.0kb downstream 9503 true Scaffold753: 133754-143256 Capsella grandiflora
Cagra.0753s0035 2.0kb downstream 2.0kb downstream 2000 false Scaffold753: 133754-135753 Capsella grandiflora
Cagra.0753s0035 5.0kb upstream 5.0kb upstream 12503 true Scaffold753: 135754-148256 Capsella grandiflora
Cagra.0753s0035 5.0kb upstream 5.0kb upstream 5000 false Scaffold753: 143257-148256 Capsella grandiflora
Cagra.0753s0035 5.0kb downstream 5.0kb downstream 12503 true Scaffold753: 130754-143256 Capsella grandiflora
Cagra.0753s0035 5.0kb downstream 5.0kb downstream 5000 false Scaffold753: 130754-135753 Capsella grandiflora
Cagra.0753s0035 10.0kb upstream 10.0kb upstream 17503 true Scaffold753: 135754-153256 Capsella grandiflora
Cagra.0753s0035 10.0kb upstream 10.0kb upstream 10000 false Scaffold753: 143257-153256 Capsella grandiflora
Cagra.0753s0035 10.0kb downstream 10.0kb downstream 17503 true Scaffold753: 125754-143256 Capsella grandiflora
Cagra.0753s0035 10.0kb downstream 10.0kb downstream 10000 false Scaffold753: 125754-135753 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371889 5261 Brassicaceae View MSA
123831702 5264 Brassicales-Malvales View MSA
124346183 5266 SBM View MSA
124252379 5268 Malvidae View MSA
124062676 5270 Rosid View MSA
123736808 5271 Pentapetalae View MSA
122787445 5272 Eudicot View MSA
122041770 5273 Angiosperm View MSA
121347464 5274 Embryophyte View MSA
123426480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain