Gene : Cagra.0716s0021 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31235:SF43 - PEROXIDASE 24 Genomic Order:  21
Name:  ? Cagra.0716s0021 Secondary Identifier:  ? PAC:28895630
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5466 Capsella grandiflora pathologic  
Cgrandiflora PWY-7214 Capsella grandiflora pathologic  
Cgrandiflora PWY-7445 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0021 0.5kb upstream 0.5kb upstream 2299 true Scaffold716: 80130-82428 Capsella grandiflora
Cagra.0716s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 81929-82428 Capsella grandiflora
Cagra.0716s0021 0.5kb downstream 0.5kb downstream 2299 true Scaffold716: 79630-81928 Capsella grandiflora
Cagra.0716s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 79630-80129 Capsella grandiflora
Cagra.0716s0021 1.0kb upstream 1.0kb upstream 2799 true Scaffold716: 80130-82928 Capsella grandiflora
Cagra.0716s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 81929-82928 Capsella grandiflora
Cagra.0716s0021 1.0kb downstream 1.0kb downstream 2799 true Scaffold716: 79130-81928 Capsella grandiflora
Cagra.0716s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 79130-80129 Capsella grandiflora
Cagra.0716s0021 2.0kb upstream 2.0kb upstream 3799 true Scaffold716: 80130-83928 Capsella grandiflora
Cagra.0716s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 81929-83928 Capsella grandiflora
Cagra.0716s0021 2.0kb downstream 2.0kb downstream 3799 true Scaffold716: 78130-81928 Capsella grandiflora
Cagra.0716s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 78130-80129 Capsella grandiflora
Cagra.0716s0021 5.0kb upstream 5.0kb upstream 6799 true Scaffold716: 80130-86928 Capsella grandiflora
Cagra.0716s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 81929-86928 Capsella grandiflora
Cagra.0716s0021 5.0kb downstream 5.0kb downstream 6799 true Scaffold716: 75130-81928 Capsella grandiflora
Cagra.0716s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 75130-80129 Capsella grandiflora
Cagra.0716s0021 10.0kb upstream 10.0kb upstream 11799 true Scaffold716: 80130-91928 Capsella grandiflora
Cagra.0716s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 81929-91928 Capsella grandiflora
Cagra.0716s0021 10.0kb downstream 10.0kb downstream 11799 true Scaffold716: 70130-81928 Capsella grandiflora
Cagra.0716s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 70130-80129 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366131 5261 Brassicaceae View MSA
123832481 5264 Brassicales-Malvales View MSA
124338577 5266 SBM View MSA
124247065 5268 Malvidae View MSA
124071148 5270 Rosid View MSA
123748177 5271 Pentapetalae View MSA
122794454 5272 Eudicot View MSA
122051577 5273 Angiosperm View MSA
121351674 5274 Embryophyte View MSA
123426672 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain