Gene : Cagra.0716s0029 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22950:SF240 - TRANSMEMBRANE AMINO ACID TRANSPORTER-RELATED Genomic Order:  29
Name:  ? Cagra.0716s0029 Secondary Identifier:  ? PAC:28895623
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0029 0.5kb upstream 0.5kb upstream 5022 true Scaffold716: 103253-108274 Capsella grandiflora
Cagra.0716s0029 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 107775-108274 Capsella grandiflora
Cagra.0716s0029 0.5kb downstream 0.5kb downstream 5022 true Scaffold716: 102753-107774 Capsella grandiflora
Cagra.0716s0029 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 102753-103252 Capsella grandiflora
Cagra.0716s0029 1.0kb upstream 1.0kb upstream 5522 true Scaffold716: 103253-108774 Capsella grandiflora
Cagra.0716s0029 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 107775-108774 Capsella grandiflora
Cagra.0716s0029 1.0kb downstream 1.0kb downstream 5522 true Scaffold716: 102253-107774 Capsella grandiflora
Cagra.0716s0029 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 102253-103252 Capsella grandiflora
Cagra.0716s0029 2.0kb upstream 2.0kb upstream 6522 true Scaffold716: 103253-109774 Capsella grandiflora
Cagra.0716s0029 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 107775-109774 Capsella grandiflora
Cagra.0716s0029 2.0kb downstream 2.0kb downstream 6522 true Scaffold716: 101253-107774 Capsella grandiflora
Cagra.0716s0029 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 101253-103252 Capsella grandiflora
Cagra.0716s0029 5.0kb upstream 5.0kb upstream 9522 true Scaffold716: 103253-112774 Capsella grandiflora
Cagra.0716s0029 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 107775-112774 Capsella grandiflora
Cagra.0716s0029 5.0kb downstream 5.0kb downstream 9522 true Scaffold716: 98253-107774 Capsella grandiflora
Cagra.0716s0029 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 98253-103252 Capsella grandiflora
Cagra.0716s0029 10.0kb upstream 10.0kb upstream 14522 true Scaffold716: 103253-117774 Capsella grandiflora
Cagra.0716s0029 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 107775-117774 Capsella grandiflora
Cagra.0716s0029 10.0kb downstream 10.0kb downstream 14522 true Scaffold716: 93253-107774 Capsella grandiflora
Cagra.0716s0029 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 93253-103252 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371755 5261 Brassicaceae View MSA
123840441 5264 Brassicales-Malvales View MSA
124345354 5266 SBM View MSA
124237365 5268 Malvidae View MSA
124062322 5270 Rosid View MSA
123752113 5271 Pentapetalae View MSA
122789589 5272 Eudicot View MSA
122050911 5273 Angiosperm View MSA
123429000 5275 Viridiplantae View MSA
121351519 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain