Gene : Cagra.0716s0063 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11620 - 60S RIBOSOMAL PROTEIN L23A Genomic Order:  63
Name:  ? Cagra.0716s0063 Secondary Identifier:  ? PAC:28895681
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0063 0.5kb upstream 0.5kb upstream 1921 true Scaffold716: 258432-260352 Capsella grandiflora
Cagra.0716s0063 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 258432-258931 Capsella grandiflora
Cagra.0716s0063 0.5kb downstream 0.5kb downstream 1921 true Scaffold716: 258932-260852 Capsella grandiflora
Cagra.0716s0063 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 260353-260852 Capsella grandiflora
Cagra.0716s0063 1.0kb upstream 1.0kb upstream 2421 true Scaffold716: 257932-260352 Capsella grandiflora
Cagra.0716s0063 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 257932-258931 Capsella grandiflora
Cagra.0716s0063 1.0kb downstream 1.0kb downstream 2421 true Scaffold716: 258932-261352 Capsella grandiflora
Cagra.0716s0063 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 260353-261352 Capsella grandiflora
Cagra.0716s0063 2.0kb upstream 2.0kb upstream 3421 true Scaffold716: 256932-260352 Capsella grandiflora
Cagra.0716s0063 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 256932-258931 Capsella grandiflora
Cagra.0716s0063 2.0kb downstream 2.0kb downstream 3421 true Scaffold716: 258932-262352 Capsella grandiflora
Cagra.0716s0063 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 260353-262352 Capsella grandiflora
Cagra.0716s0063 5.0kb upstream 5.0kb upstream 6421 true Scaffold716: 253932-260352 Capsella grandiflora
Cagra.0716s0063 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 253932-258931 Capsella grandiflora
Cagra.0716s0063 5.0kb downstream 5.0kb downstream 6421 true Scaffold716: 258932-265352 Capsella grandiflora
Cagra.0716s0063 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 260353-265352 Capsella grandiflora
Cagra.0716s0063 10.0kb upstream 10.0kb upstream 11421 true Scaffold716: 248932-260352 Capsella grandiflora
Cagra.0716s0063 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 248932-258931 Capsella grandiflora
Cagra.0716s0063 10.0kb downstream 10.0kb downstream 11421 true Scaffold716: 258932-270352 Capsella grandiflora
Cagra.0716s0063 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 260353-270352 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381484 5261 Brassicaceae View MSA
123832766 5264 Brassicales-Malvales View MSA
124350929 5266 SBM View MSA
124253645 5268 Malvidae View MSA
124072262 5270 Rosid View MSA
123746910 5271 Pentapetalae View MSA
122787789 5272 Eudicot View MSA
122048184 5273 Angiosperm View MSA
121343898 5274 Embryophyte View MSA
123423801 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain