Gene : Cagra.0716s0093 C. grandiflora v1.1
Defline:  (1 of 2) PF00651//PF00917 - BTB/POZ domain (BTB) // MATH domain (MATH) Genomic Order:  93
Name:  ? Cagra.0716s0093 Secondary Identifier:  ? PAC:28895689
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0093 0.5kb upstream 0.5kb upstream 3807 true Scaffold716: 373492-377298 Capsella grandiflora
Cagra.0716s0093 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 373492-373991 Capsella grandiflora
Cagra.0716s0093 0.5kb downstream 0.5kb downstream 3807 true Scaffold716: 373992-377798 Capsella grandiflora
Cagra.0716s0093 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 377299-377798 Capsella grandiflora
Cagra.0716s0093 1.0kb upstream 1.0kb upstream 4307 true Scaffold716: 372992-377298 Capsella grandiflora
Cagra.0716s0093 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 372992-373991 Capsella grandiflora
Cagra.0716s0093 1.0kb downstream 1.0kb downstream 4307 true Scaffold716: 373992-378298 Capsella grandiflora
Cagra.0716s0093 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 377299-378298 Capsella grandiflora
Cagra.0716s0093 2.0kb upstream 2.0kb upstream 5307 true Scaffold716: 371992-377298 Capsella grandiflora
Cagra.0716s0093 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 371992-373991 Capsella grandiflora
Cagra.0716s0093 2.0kb downstream 2.0kb downstream 4843 true Scaffold716: 373992-378834 Capsella grandiflora
Cagra.0716s0093 2.0kb downstream 2.0kb downstream 1536 false Scaffold716: 377299-378834 Capsella grandiflora
Cagra.0716s0093 5.0kb upstream 5.0kb upstream 8307 true Scaffold716: 368992-377298 Capsella grandiflora
Cagra.0716s0093 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 368992-373991 Capsella grandiflora
Cagra.0716s0093 5.0kb downstream 5.0kb downstream 4843 true Scaffold716: 373992-378834 Capsella grandiflora
Cagra.0716s0093 5.0kb downstream 5.0kb downstream 1536 false Scaffold716: 377299-378834 Capsella grandiflora
Cagra.0716s0093 10.0kb upstream 10.0kb upstream 13307 true Scaffold716: 363992-377298 Capsella grandiflora
Cagra.0716s0093 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 363992-373991 Capsella grandiflora
Cagra.0716s0093 10.0kb downstream 10.0kb downstream 4843 true Scaffold716: 373992-378834 Capsella grandiflora
Cagra.0716s0093 10.0kb downstream 10.0kb downstream 1536 false Scaffold716: 377299-378834 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360907 5261 Brassicaceae View MSA
123828981 5264 Brassicales-Malvales View MSA
124344528 5266 SBM View MSA
124241974 5268 Malvidae View MSA
124067475 5270 Rosid View MSA
123739002 5271 Pentapetalae View MSA
122796766 5272 Eudicot View MSA
122042496 5273 Angiosperm View MSA
121309979 5274 Embryophyte View MSA
123428082 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain