Gene : Cagra.0736s0007 C. grandiflora v1.1
Defline:  (1 of 3) PTHR27001:SF152 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE:MMM17-RELATED Genomic Order:  7
Name:  ? Cagra.0736s0007 Secondary Identifier:  ? PAC:28899814
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0736s0007 0.5kb upstream 0.5kb upstream 5169 true Scaffold736: 26929-32097 Capsella grandiflora
Cagra.0736s0007 0.5kb upstream 0.5kb upstream 500 false Scaffold736: 26929-27428 Capsella grandiflora
Cagra.0736s0007 0.5kb downstream 0.5kb downstream 5169 true Scaffold736: 27429-32597 Capsella grandiflora
Cagra.0736s0007 0.5kb downstream 0.5kb downstream 500 false Scaffold736: 32098-32597 Capsella grandiflora
Cagra.0736s0007 1.0kb upstream 1.0kb upstream 5669 true Scaffold736: 26429-32097 Capsella grandiflora
Cagra.0736s0007 1.0kb upstream 1.0kb upstream 1000 false Scaffold736: 26429-27428 Capsella grandiflora
Cagra.0736s0007 1.0kb downstream 1.0kb downstream 5669 true Scaffold736: 27429-33097 Capsella grandiflora
Cagra.0736s0007 1.0kb downstream 1.0kb downstream 1000 false Scaffold736: 32098-33097 Capsella grandiflora
Cagra.0736s0007 2.0kb upstream 2.0kb upstream 6669 true Scaffold736: 25429-32097 Capsella grandiflora
Cagra.0736s0007 2.0kb upstream 2.0kb upstream 2000 false Scaffold736: 25429-27428 Capsella grandiflora
Cagra.0736s0007 2.0kb downstream 2.0kb downstream 6669 true Scaffold736: 27429-34097 Capsella grandiflora
Cagra.0736s0007 2.0kb downstream 2.0kb downstream 2000 false Scaffold736: 32098-34097 Capsella grandiflora
Cagra.0736s0007 5.0kb upstream 5.0kb upstream 9669 true Scaffold736: 22429-32097 Capsella grandiflora
Cagra.0736s0007 5.0kb upstream 5.0kb upstream 5000 false Scaffold736: 22429-27428 Capsella grandiflora
Cagra.0736s0007 5.0kb downstream 5.0kb downstream 9669 true Scaffold736: 27429-37097 Capsella grandiflora
Cagra.0736s0007 5.0kb downstream 5.0kb downstream 5000 false Scaffold736: 32098-37097 Capsella grandiflora
Cagra.0736s0007 10.0kb upstream 10.0kb upstream 14669 true Scaffold736: 17429-32097 Capsella grandiflora
Cagra.0736s0007 10.0kb upstream 10.0kb upstream 10000 false Scaffold736: 17429-27428 Capsella grandiflora
Cagra.0736s0007 10.0kb downstream 10.0kb downstream 14669 true Scaffold736: 27429-42097 Capsella grandiflora
Cagra.0736s0007 10.0kb downstream 10.0kb downstream 10000 false Scaffold736: 32098-42097 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374162 5261 Brassicaceae View MSA
123827408 5264 Brassicales-Malvales View MSA
124338903 5266 SBM View MSA
124237356 5268 Malvidae View MSA
124066375 5270 Rosid View MSA
123738565 5271 Pentapetalae View MSA
122788767 5272 Eudicot View MSA
122047607 5273 Angiosperm View MSA
121351058 5274 Embryophyte View MSA
123381993 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain