Gene : Cagra.0736s0006 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10742:SF210 - LYSINE-SPECIFIC HISTONE DEMETHYLASE 1 HOMOLOG 2 Genomic Order:  6
Name:  ? Cagra.0736s0006 Secondary Identifier:  ? PAC:28899816
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-6441 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0736s0006 0.5kb upstream 0.5kb upstream 3083 true Scaffold736: 20598-23680 Capsella grandiflora
Cagra.0736s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold736: 23181-23680 Capsella grandiflora
Cagra.0736s0006 0.5kb downstream 0.5kb downstream 3083 true Scaffold736: 20098-23180 Capsella grandiflora
Cagra.0736s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold736: 20098-20597 Capsella grandiflora
Cagra.0736s0006 1.0kb upstream 1.0kb upstream 3583 true Scaffold736: 20598-24180 Capsella grandiflora
Cagra.0736s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold736: 23181-24180 Capsella grandiflora
Cagra.0736s0006 1.0kb downstream 1.0kb downstream 3583 true Scaffold736: 19598-23180 Capsella grandiflora
Cagra.0736s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold736: 19598-20597 Capsella grandiflora
Cagra.0736s0006 2.0kb upstream 2.0kb upstream 4583 true Scaffold736: 20598-25180 Capsella grandiflora
Cagra.0736s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold736: 23181-25180 Capsella grandiflora
Cagra.0736s0006 2.0kb downstream 2.0kb downstream 4583 true Scaffold736: 18598-23180 Capsella grandiflora
Cagra.0736s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold736: 18598-20597 Capsella grandiflora
Cagra.0736s0006 5.0kb upstream 5.0kb upstream 7583 true Scaffold736: 20598-28180 Capsella grandiflora
Cagra.0736s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold736: 23181-28180 Capsella grandiflora
Cagra.0736s0006 5.0kb downstream 5.0kb downstream 7583 true Scaffold736: 15598-23180 Capsella grandiflora
Cagra.0736s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold736: 15598-20597 Capsella grandiflora
Cagra.0736s0006 10.0kb upstream 10.0kb upstream 12583 true Scaffold736: 20598-33180 Capsella grandiflora
Cagra.0736s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold736: 23181-33180 Capsella grandiflora
Cagra.0736s0006 10.0kb downstream 10.0kb downstream 12583 true Scaffold736: 10598-23180 Capsella grandiflora
Cagra.0736s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold736: 10598-20597 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374256 5261 Brassicaceae View MSA
123829075 5264 Brassicales-Malvales View MSA
124336597 5266 SBM View MSA
124242009 5268 Malvidae View MSA
124065563 5270 Rosid View MSA
123738735 5271 Pentapetalae View MSA
122791879 5272 Eudicot View MSA
122041755 5273 Angiosperm View MSA
121350960 5274 Embryophyte View MSA
123428250 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain