Gene : Cagra.0701s0009 C. grandiflora v1.1
Defline:  (1 of 1) KOG0919 - C-5 cytosine-specific DNA methylase Genomic Order:  9
Name:  ? Cagra.0701s0009 Secondary Identifier:  ? PAC:28913795
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0701s0009 0.5kb upstream 0.5kb upstream 3230 true Scaffold701: 25040-28269 Capsella grandiflora
Cagra.0701s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold701: 27770-28269 Capsella grandiflora
Cagra.0701s0009 0.5kb downstream 0.5kb downstream 3230 true Scaffold701: 24540-27769 Capsella grandiflora
Cagra.0701s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold701: 24540-25039 Capsella grandiflora
Cagra.0701s0009 1.0kb upstream 1.0kb upstream 3730 true Scaffold701: 25040-28769 Capsella grandiflora
Cagra.0701s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold701: 27770-28769 Capsella grandiflora
Cagra.0701s0009 1.0kb downstream 1.0kb downstream 3730 true Scaffold701: 24040-27769 Capsella grandiflora
Cagra.0701s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold701: 24040-25039 Capsella grandiflora
Cagra.0701s0009 2.0kb upstream 2.0kb upstream 4730 true Scaffold701: 25040-29769 Capsella grandiflora
Cagra.0701s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold701: 27770-29769 Capsella grandiflora
Cagra.0701s0009 2.0kb downstream 2.0kb downstream 4730 true Scaffold701: 23040-27769 Capsella grandiflora
Cagra.0701s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold701: 23040-25039 Capsella grandiflora
Cagra.0701s0009 5.0kb upstream 5.0kb upstream 7730 true Scaffold701: 25040-32769 Capsella grandiflora
Cagra.0701s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold701: 27770-32769 Capsella grandiflora
Cagra.0701s0009 5.0kb downstream 5.0kb downstream 7730 true Scaffold701: 20040-27769 Capsella grandiflora
Cagra.0701s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold701: 20040-25039 Capsella grandiflora
Cagra.0701s0009 10.0kb upstream 10.0kb upstream 12730 true Scaffold701: 25040-37769 Capsella grandiflora
Cagra.0701s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold701: 27770-37769 Capsella grandiflora
Cagra.0701s0009 10.0kb downstream 10.0kb downstream 12730 true Scaffold701: 15040-27769 Capsella grandiflora
Cagra.0701s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold701: 15040-25039 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373730 5261 Brassicaceae View MSA
123836316 5264 Brassicales-Malvales View MSA
124343310 5266 SBM View MSA
124237015 5268 Malvidae View MSA
124060952 5270 Rosid View MSA
123740038 5271 Pentapetalae View MSA
122790174 5272 Eudicot View MSA
122042989 5273 Angiosperm View MSA
121345070 5274 Embryophyte View MSA
123423972 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain