Gene : Cagra.0701s0020 C. grandiflora v1.1
Defline:  (1 of 16) PF04782//PF04783 - Protein of unknown function (DUF632) (DUF632) // Protein of unknown function (DUF630) (DUF630) Genomic Order:  20
Name:  ? Cagra.0701s0020 Secondary Identifier:  ? PAC:28913767
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0701s0020 0.5kb upstream 0.5kb upstream 3904 true Scaffold701: 61166-65069 Capsella grandiflora
Cagra.0701s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold701: 64570-65069 Capsella grandiflora
Cagra.0701s0020 0.5kb downstream 0.5kb downstream 3904 true Scaffold701: 60666-64569 Capsella grandiflora
Cagra.0701s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold701: 60666-61165 Capsella grandiflora
Cagra.0701s0020 1.0kb upstream 1.0kb upstream 4404 true Scaffold701: 61166-65569 Capsella grandiflora
Cagra.0701s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold701: 64570-65569 Capsella grandiflora
Cagra.0701s0020 1.0kb downstream 1.0kb downstream 4404 true Scaffold701: 60166-64569 Capsella grandiflora
Cagra.0701s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold701: 60166-61165 Capsella grandiflora
Cagra.0701s0020 2.0kb upstream 2.0kb upstream 5404 true Scaffold701: 61166-66569 Capsella grandiflora
Cagra.0701s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold701: 64570-66569 Capsella grandiflora
Cagra.0701s0020 2.0kb downstream 2.0kb downstream 5404 true Scaffold701: 59166-64569 Capsella grandiflora
Cagra.0701s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold701: 59166-61165 Capsella grandiflora
Cagra.0701s0020 5.0kb upstream 5.0kb upstream 8404 true Scaffold701: 61166-69569 Capsella grandiflora
Cagra.0701s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold701: 64570-69569 Capsella grandiflora
Cagra.0701s0020 5.0kb downstream 5.0kb downstream 8404 true Scaffold701: 56166-64569 Capsella grandiflora
Cagra.0701s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold701: 56166-61165 Capsella grandiflora
Cagra.0701s0020 10.0kb upstream 10.0kb upstream 13404 true Scaffold701: 61166-74569 Capsella grandiflora
Cagra.0701s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold701: 64570-74569 Capsella grandiflora
Cagra.0701s0020 10.0kb downstream 10.0kb downstream 13404 true Scaffold701: 51166-64569 Capsella grandiflora
Cagra.0701s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold701: 51166-61165 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371051 5261 Brassicaceae View MSA
123837528 5264 Brassicales-Malvales View MSA
124345376 5266 SBM View MSA
124243055 5268 Malvidae View MSA
124061177 5270 Rosid View MSA
123744984 5271 Pentapetalae View MSA
122791857 5272 Eudicot View MSA
122051058 5273 Angiosperm View MSA
121350303 5274 Embryophyte View MSA
123381668 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain