Gene : Cagra.0701s0030 C. grandiflora v1.1
Defline:  (1 of 4) PTHR12446:SF14 - PROTEIN LIN-54 HOMOLOG Genomic Order:  30
Name:  ? Cagra.0701s0030 Secondary Identifier:  ? PAC:28913787
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0701s0030 0.5kb upstream 0.5kb upstream 2588 true Scaffold701: 113245-115832 Capsella grandiflora
Cagra.0701s0030 0.5kb upstream 0.5kb upstream 500 false Scaffold701: 115333-115832 Capsella grandiflora
Cagra.0701s0030 0.5kb downstream 0.5kb downstream 2588 true Scaffold701: 112745-115332 Capsella grandiflora
Cagra.0701s0030 0.5kb downstream 0.5kb downstream 500 false Scaffold701: 112745-113244 Capsella grandiflora
Cagra.0701s0030 1.0kb upstream 1.0kb upstream 3088 true Scaffold701: 113245-116332 Capsella grandiflora
Cagra.0701s0030 1.0kb upstream 1.0kb upstream 1000 false Scaffold701: 115333-116332 Capsella grandiflora
Cagra.0701s0030 1.0kb downstream 1.0kb downstream 3088 true Scaffold701: 112245-115332 Capsella grandiflora
Cagra.0701s0030 1.0kb downstream 1.0kb downstream 1000 false Scaffold701: 112245-113244 Capsella grandiflora
Cagra.0701s0030 2.0kb upstream 2.0kb upstream 4088 true Scaffold701: 113245-117332 Capsella grandiflora
Cagra.0701s0030 2.0kb upstream 2.0kb upstream 2000 false Scaffold701: 115333-117332 Capsella grandiflora
Cagra.0701s0030 2.0kb downstream 2.0kb downstream 4088 true Scaffold701: 111245-115332 Capsella grandiflora
Cagra.0701s0030 2.0kb downstream 2.0kb downstream 2000 false Scaffold701: 111245-113244 Capsella grandiflora
Cagra.0701s0030 5.0kb upstream 5.0kb upstream 7088 true Scaffold701: 113245-120332 Capsella grandiflora
Cagra.0701s0030 5.0kb upstream 5.0kb upstream 5000 false Scaffold701: 115333-120332 Capsella grandiflora
Cagra.0701s0030 5.0kb downstream 5.0kb downstream 7088 true Scaffold701: 108245-115332 Capsella grandiflora
Cagra.0701s0030 5.0kb downstream 5.0kb downstream 5000 false Scaffold701: 108245-113244 Capsella grandiflora
Cagra.0701s0030 10.0kb upstream 10.0kb upstream 12088 true Scaffold701: 113245-125332 Capsella grandiflora
Cagra.0701s0030 10.0kb upstream 10.0kb upstream 10000 false Scaffold701: 115333-125332 Capsella grandiflora
Cagra.0701s0030 10.0kb downstream 10.0kb downstream 12088 true Scaffold701: 103245-115332 Capsella grandiflora
Cagra.0701s0030 10.0kb downstream 10.0kb downstream 10000 false Scaffold701: 103245-113244 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370688 5261 Brassicaceae View MSA
123800018 5264 Brassicales-Malvales View MSA
124297479 5266 SBM View MSA
124250296 5268 Malvidae View MSA
124073208 5270 Rosid View MSA
123756225 5271 Pentapetalae View MSA
122777394 5272 Eudicot View MSA
122042831 5273 Angiosperm View MSA
121349847 5274 Embryophyte View MSA
123426596 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain