Gene : Cagra.0712s0003 C. grandiflora v1.1
Defline:  (1 of 2) KOG4020 - Protein DRE2, required for cell viability Genomic Order:  3
Name:  ? Cagra.0712s0003 Secondary Identifier:  ? PAC:28899922
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0712s0003 0.5kb upstream 0.5kb upstream 2637 true Scaffold712: 2780-5416 Capsella grandiflora
Cagra.0712s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold712: 4917-5416 Capsella grandiflora
Cagra.0712s0003 0.5kb downstream 0.5kb downstream 2637 true Scaffold712: 2280-4916 Capsella grandiflora
Cagra.0712s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold712: 2280-2779 Capsella grandiflora
Cagra.0712s0003 1.0kb upstream 1.0kb upstream 3137 true Scaffold712: 2780-5916 Capsella grandiflora
Cagra.0712s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold712: 4917-5916 Capsella grandiflora
Cagra.0712s0003 1.0kb downstream 1.0kb downstream 3137 true Scaffold712: 1780-4916 Capsella grandiflora
Cagra.0712s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold712: 1780-2779 Capsella grandiflora
Cagra.0712s0003 2.0kb upstream 2.0kb upstream 4137 true Scaffold712: 2780-6916 Capsella grandiflora
Cagra.0712s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold712: 4917-6916 Capsella grandiflora
Cagra.0712s0003 2.0kb downstream 2.0kb downstream 4137 true Scaffold712: 780-4916 Capsella grandiflora
Cagra.0712s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold712: 780-2779 Capsella grandiflora
Cagra.0712s0003 5.0kb upstream 5.0kb upstream 7137 true Scaffold712: 2780-9916 Capsella grandiflora
Cagra.0712s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold712: 4917-9916 Capsella grandiflora
Cagra.0712s0003 5.0kb downstream 5.0kb downstream 4916 true Scaffold712: 1-4916 Capsella grandiflora
Cagra.0712s0003 5.0kb downstream 5.0kb downstream 2779 false Scaffold712: 1-2779 Capsella grandiflora
Cagra.0712s0003 10.0kb upstream 10.0kb upstream 12137 true Scaffold712: 2780-14916 Capsella grandiflora
Cagra.0712s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold712: 4917-14916 Capsella grandiflora
Cagra.0712s0003 10.0kb downstream 10.0kb downstream 4916 true Scaffold712: 1-4916 Capsella grandiflora
Cagra.0712s0003 10.0kb downstream 10.0kb downstream 2779 false Scaffold712: 1-2779 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367716 5261 Brassicaceae View MSA
123831522 5264 Brassicales-Malvales View MSA
124341948 5266 SBM View MSA
124240685 5268 Malvidae View MSA
124060414 5270 Rosid View MSA
123741055 5271 Pentapetalae View MSA
122788578 5272 Eudicot View MSA
122047099 5273 Angiosperm View MSA
121344266 5274 Embryophyte View MSA
123424470 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain