Gene : Cagra.0712s0009 C. grandiflora v1.1
Defline:  (1 of 48) PF14365 - Domain of unknown function (DUF4409) (DUF4409) Genomic Order:  9
Name:  ? Cagra.0712s0009 Secondary Identifier:  ? PAC:28899892
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0712s0009 0.5kb upstream 0.5kb upstream 4429 true Scaffold712: 30751-35179 Capsella grandiflora
Cagra.0712s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold712: 30751-31250 Capsella grandiflora
Cagra.0712s0009 0.5kb downstream 0.5kb downstream 4429 true Scaffold712: 31251-35679 Capsella grandiflora
Cagra.0712s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold712: 35180-35679 Capsella grandiflora
Cagra.0712s0009 1.0kb upstream 1.0kb upstream 4929 true Scaffold712: 30251-35179 Capsella grandiflora
Cagra.0712s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold712: 30251-31250 Capsella grandiflora
Cagra.0712s0009 1.0kb downstream 1.0kb downstream 4929 true Scaffold712: 31251-36179 Capsella grandiflora
Cagra.0712s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold712: 35180-36179 Capsella grandiflora
Cagra.0712s0009 2.0kb upstream 2.0kb upstream 5929 true Scaffold712: 29251-35179 Capsella grandiflora
Cagra.0712s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold712: 29251-31250 Capsella grandiflora
Cagra.0712s0009 2.0kb downstream 2.0kb downstream 5929 true Scaffold712: 31251-37179 Capsella grandiflora
Cagra.0712s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold712: 35180-37179 Capsella grandiflora
Cagra.0712s0009 5.0kb upstream 5.0kb upstream 8929 true Scaffold712: 26251-35179 Capsella grandiflora
Cagra.0712s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold712: 26251-31250 Capsella grandiflora
Cagra.0712s0009 5.0kb downstream 5.0kb downstream 8929 true Scaffold712: 31251-40179 Capsella grandiflora
Cagra.0712s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold712: 35180-40179 Capsella grandiflora
Cagra.0712s0009 10.0kb upstream 10.0kb upstream 13929 true Scaffold712: 21251-35179 Capsella grandiflora
Cagra.0712s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold712: 21251-31250 Capsella grandiflora
Cagra.0712s0009 10.0kb downstream 10.0kb downstream 13929 true Scaffold712: 31251-45179 Capsella grandiflora
Cagra.0712s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold712: 35180-45179 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369003 5261 Brassicaceae View MSA
123835325 5264 Brassicales-Malvales View MSA
124344235 5266 SBM View MSA
124244653 5268 Malvidae View MSA
124062143 5270 Rosid View MSA
123739520 5271 Pentapetalae View MSA
122793543 5272 Eudicot View MSA
122048066 5273 Angiosperm View MSA
121349991 5274 Embryophyte View MSA
123381532 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain