Gene : Cagra.0712s0020 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12506:SF27 - ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN 34-RELATED Genomic Order:  20
Name:  ? Cagra.0712s0020 Secondary Identifier:  ? PAC:28899914
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0712s0020 0.5kb upstream 0.5kb upstream 3653 true Scaffold712: 67813-71465 Capsella grandiflora
Cagra.0712s0020 0.5kb upstream 0.5kb upstream 500 false Scaffold712: 67813-68312 Capsella grandiflora
Cagra.0712s0020 0.5kb downstream 0.5kb downstream 3653 true Scaffold712: 68313-71965 Capsella grandiflora
Cagra.0712s0020 0.5kb downstream 0.5kb downstream 500 false Scaffold712: 71466-71965 Capsella grandiflora
Cagra.0712s0020 1.0kb upstream 1.0kb upstream 4153 true Scaffold712: 67313-71465 Capsella grandiflora
Cagra.0712s0020 1.0kb upstream 1.0kb upstream 1000 false Scaffold712: 67313-68312 Capsella grandiflora
Cagra.0712s0020 1.0kb downstream 1.0kb downstream 4153 true Scaffold712: 68313-72465 Capsella grandiflora
Cagra.0712s0020 1.0kb downstream 1.0kb downstream 1000 false Scaffold712: 71466-72465 Capsella grandiflora
Cagra.0712s0020 2.0kb upstream 2.0kb upstream 5153 true Scaffold712: 66313-71465 Capsella grandiflora
Cagra.0712s0020 2.0kb upstream 2.0kb upstream 2000 false Scaffold712: 66313-68312 Capsella grandiflora
Cagra.0712s0020 2.0kb downstream 2.0kb downstream 5153 true Scaffold712: 68313-73465 Capsella grandiflora
Cagra.0712s0020 2.0kb downstream 2.0kb downstream 2000 false Scaffold712: 71466-73465 Capsella grandiflora
Cagra.0712s0020 5.0kb upstream 5.0kb upstream 8153 true Scaffold712: 63313-71465 Capsella grandiflora
Cagra.0712s0020 5.0kb upstream 5.0kb upstream 5000 false Scaffold712: 63313-68312 Capsella grandiflora
Cagra.0712s0020 5.0kb downstream 5.0kb downstream 8153 true Scaffold712: 68313-76465 Capsella grandiflora
Cagra.0712s0020 5.0kb downstream 5.0kb downstream 5000 false Scaffold712: 71466-76465 Capsella grandiflora
Cagra.0712s0020 10.0kb upstream 10.0kb upstream 13153 true Scaffold712: 58313-71465 Capsella grandiflora
Cagra.0712s0020 10.0kb upstream 10.0kb upstream 10000 false Scaffold712: 58313-68312 Capsella grandiflora
Cagra.0712s0020 10.0kb downstream 10.0kb downstream 13153 true Scaffold712: 68313-81465 Capsella grandiflora
Cagra.0712s0020 10.0kb downstream 10.0kb downstream 10000 false Scaffold712: 71466-81465 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366531 5261 Brassicaceae View MSA
123836159 5264 Brassicales-Malvales View MSA
124338324 5266 SBM View MSA
124244346 5268 Malvidae View MSA
124065869 5270 Rosid View MSA
123744016 5271 Pentapetalae View MSA
122797715 5272 Eudicot View MSA
122047734 5273 Angiosperm View MSA
121348027 5274 Embryophyte View MSA
123428726 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain