Gene : Cagra.0716s0016 C. grandiflora v1.1
Defline:  (1 of 10) 2.3.1.20//2.3.1.75 - Diacylglycerol O-acyltransferase / Diglyceride acyltransferase // Long-chain-alcohol O-fatty-acyltransferase / Wax synthase Genomic Order:  16
Name:  ? Cagra.0716s0016 Secondary Identifier:  ? PAC:28895627
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5885 Capsella grandiflora pathologic  
Cgrandiflora TRIGLSYN-PWY Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0716s0016 0.5kb upstream 0.5kb upstream 2649 true Scaffold716: 60579-63227 Capsella grandiflora
Cagra.0716s0016 0.5kb upstream 0.5kb upstream 500 false Scaffold716: 60579-61078 Capsella grandiflora
Cagra.0716s0016 0.5kb downstream 0.5kb downstream 2649 true Scaffold716: 61079-63727 Capsella grandiflora
Cagra.0716s0016 0.5kb downstream 0.5kb downstream 500 false Scaffold716: 63228-63727 Capsella grandiflora
Cagra.0716s0016 1.0kb upstream 1.0kb upstream 3149 true Scaffold716: 60079-63227 Capsella grandiflora
Cagra.0716s0016 1.0kb upstream 1.0kb upstream 1000 false Scaffold716: 60079-61078 Capsella grandiflora
Cagra.0716s0016 1.0kb downstream 1.0kb downstream 3149 true Scaffold716: 61079-64227 Capsella grandiflora
Cagra.0716s0016 1.0kb downstream 1.0kb downstream 1000 false Scaffold716: 63228-64227 Capsella grandiflora
Cagra.0716s0016 2.0kb upstream 2.0kb upstream 4149 true Scaffold716: 59079-63227 Capsella grandiflora
Cagra.0716s0016 2.0kb upstream 2.0kb upstream 2000 false Scaffold716: 59079-61078 Capsella grandiflora
Cagra.0716s0016 2.0kb downstream 2.0kb downstream 4149 true Scaffold716: 61079-65227 Capsella grandiflora
Cagra.0716s0016 2.0kb downstream 2.0kb downstream 2000 false Scaffold716: 63228-65227 Capsella grandiflora
Cagra.0716s0016 5.0kb upstream 5.0kb upstream 7149 true Scaffold716: 56079-63227 Capsella grandiflora
Cagra.0716s0016 5.0kb upstream 5.0kb upstream 5000 false Scaffold716: 56079-61078 Capsella grandiflora
Cagra.0716s0016 5.0kb downstream 5.0kb downstream 7149 true Scaffold716: 61079-68227 Capsella grandiflora
Cagra.0716s0016 5.0kb downstream 5.0kb downstream 5000 false Scaffold716: 63228-68227 Capsella grandiflora
Cagra.0716s0016 10.0kb upstream 10.0kb upstream 12149 true Scaffold716: 51079-63227 Capsella grandiflora
Cagra.0716s0016 10.0kb upstream 10.0kb upstream 10000 false Scaffold716: 51079-61078 Capsella grandiflora
Cagra.0716s0016 10.0kb downstream 10.0kb downstream 12149 true Scaffold716: 61079-73227 Capsella grandiflora
Cagra.0716s0016 10.0kb downstream 10.0kb downstream 10000 false Scaffold716: 63228-73227 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122381552 5261 Brassicaceae View MSA
123803305 5264 Brassicales-Malvales View MSA
124300422 5266 SBM View MSA
124151609 5268 Malvidae View MSA
124072353 5270 Rosid View MSA
123749646 5271 Pentapetalae View MSA
122794217 5272 Eudicot View MSA
122046091 5273 Angiosperm View MSA
123428993 5275 Viridiplantae View MSA
121351027 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain