Gene : Cagra.0690s0034 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22847//PTHR22847:SF478 - WD40 REPEAT PROTEIN Genomic Order:  34
Name:  ? Cagra.0690s0034 Secondary Identifier:  ? PAC:28893773
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0034 0.5kb upstream 0.5kb upstream 3841 true Scaffold690: 135019-138859 Capsella grandiflora
Cagra.0690s0034 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 138360-138859 Capsella grandiflora
Cagra.0690s0034 0.5kb downstream 0.5kb downstream 3841 true Scaffold690: 134519-138359 Capsella grandiflora
Cagra.0690s0034 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 134519-135018 Capsella grandiflora
Cagra.0690s0034 1.0kb upstream 1.0kb upstream 4341 true Scaffold690: 135019-139359 Capsella grandiflora
Cagra.0690s0034 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 138360-139359 Capsella grandiflora
Cagra.0690s0034 1.0kb downstream 1.0kb downstream 4341 true Scaffold690: 134019-138359 Capsella grandiflora
Cagra.0690s0034 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 134019-135018 Capsella grandiflora
Cagra.0690s0034 2.0kb upstream 2.0kb upstream 5341 true Scaffold690: 135019-140359 Capsella grandiflora
Cagra.0690s0034 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 138360-140359 Capsella grandiflora
Cagra.0690s0034 2.0kb downstream 2.0kb downstream 5341 true Scaffold690: 133019-138359 Capsella grandiflora
Cagra.0690s0034 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 133019-135018 Capsella grandiflora
Cagra.0690s0034 5.0kb upstream 5.0kb upstream 8341 true Scaffold690: 135019-143359 Capsella grandiflora
Cagra.0690s0034 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 138360-143359 Capsella grandiflora
Cagra.0690s0034 5.0kb downstream 5.0kb downstream 8341 true Scaffold690: 130019-138359 Capsella grandiflora
Cagra.0690s0034 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 130019-135018 Capsella grandiflora
Cagra.0690s0034 10.0kb upstream 10.0kb upstream 13341 true Scaffold690: 135019-148359 Capsella grandiflora
Cagra.0690s0034 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 138360-148359 Capsella grandiflora
Cagra.0690s0034 10.0kb downstream 10.0kb downstream 13341 true Scaffold690: 125019-138359 Capsella grandiflora
Cagra.0690s0034 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 125019-135018 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041408 5273 Angiosperm View MSA
122373222 5261 Brassicaceae View MSA
123836250 5264 Brassicales-Malvales View MSA
124350109 5266 SBM View MSA
124245380 5268 Malvidae View MSA
124065588 5270 Rosid View MSA
123745758 5271 Pentapetalae View MSA
122795577 5272 Eudicot View MSA
121348063 5274 Embryophyte View MSA
123428605 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain