Gene : Cagra.0690s0043 C. grandiflora v1.1
Defline:  (1 of 1) PTHR33602:SF1 - REGULATORY PROTEIN RECX Genomic Order:  43
Name:  ? Cagra.0690s0043 Secondary Identifier:  ? PAC:28893755
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0043 0.5kb upstream 0.5kb upstream 2479 true Scaffold690: 179116-181594 Capsella grandiflora
Cagra.0690s0043 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 179116-179615 Capsella grandiflora
Cagra.0690s0043 0.5kb downstream 0.5kb downstream 2479 true Scaffold690: 179616-182094 Capsella grandiflora
Cagra.0690s0043 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 181595-182094 Capsella grandiflora
Cagra.0690s0043 1.0kb upstream 1.0kb upstream 2979 true Scaffold690: 178616-181594 Capsella grandiflora
Cagra.0690s0043 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 178616-179615 Capsella grandiflora
Cagra.0690s0043 1.0kb downstream 1.0kb downstream 2979 true Scaffold690: 179616-182594 Capsella grandiflora
Cagra.0690s0043 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 181595-182594 Capsella grandiflora
Cagra.0690s0043 2.0kb upstream 2.0kb upstream 3979 true Scaffold690: 177616-181594 Capsella grandiflora
Cagra.0690s0043 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 177616-179615 Capsella grandiflora
Cagra.0690s0043 2.0kb downstream 2.0kb downstream 3979 true Scaffold690: 179616-183594 Capsella grandiflora
Cagra.0690s0043 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 181595-183594 Capsella grandiflora
Cagra.0690s0043 5.0kb upstream 5.0kb upstream 6979 true Scaffold690: 174616-181594 Capsella grandiflora
Cagra.0690s0043 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 174616-179615 Capsella grandiflora
Cagra.0690s0043 5.0kb downstream 5.0kb downstream 6979 true Scaffold690: 179616-186594 Capsella grandiflora
Cagra.0690s0043 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 181595-186594 Capsella grandiflora
Cagra.0690s0043 10.0kb upstream 10.0kb upstream 11979 true Scaffold690: 169616-181594 Capsella grandiflora
Cagra.0690s0043 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 169616-179615 Capsella grandiflora
Cagra.0690s0043 10.0kb downstream 10.0kb downstream 11979 true Scaffold690: 179616-191594 Capsella grandiflora
Cagra.0690s0043 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 181595-191594 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122343833 5261 Brassicaceae View MSA
123837588 5264 Brassicales-Malvales View MSA
124339964 5266 SBM View MSA
124240812 5268 Malvidae View MSA
124072407 5270 Rosid View MSA
123740860 5271 Pentapetalae View MSA
122795277 5272 Eudicot View MSA
122048488 5273 Angiosperm View MSA
121349791 5274 Embryophyte View MSA
123426676 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain