Gene : Cagra.0690s0047 C. grandiflora v1.1
Defline:  (1 of 3) PTHR12758:SF13 - GBF-INTERACTING PROTEIN 1 Genomic Order:  47
Name:  ? Cagra.0690s0047 Secondary Identifier:  ? PAC:28893800
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0047 0.5kb upstream 0.5kb upstream 3902 true Scaffold690: 190259-194160 Capsella grandiflora
Cagra.0690s0047 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 190259-190758 Capsella grandiflora
Cagra.0690s0047 0.5kb downstream 0.5kb downstream 3902 true Scaffold690: 190759-194660 Capsella grandiflora
Cagra.0690s0047 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 194161-194660 Capsella grandiflora
Cagra.0690s0047 1.0kb upstream 1.0kb upstream 4402 true Scaffold690: 189759-194160 Capsella grandiflora
Cagra.0690s0047 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 189759-190758 Capsella grandiflora
Cagra.0690s0047 1.0kb downstream 1.0kb downstream 4402 true Scaffold690: 190759-195160 Capsella grandiflora
Cagra.0690s0047 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 194161-195160 Capsella grandiflora
Cagra.0690s0047 2.0kb upstream 2.0kb upstream 5402 true Scaffold690: 188759-194160 Capsella grandiflora
Cagra.0690s0047 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 188759-190758 Capsella grandiflora
Cagra.0690s0047 2.0kb downstream 2.0kb downstream 5402 true Scaffold690: 190759-196160 Capsella grandiflora
Cagra.0690s0047 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 194161-196160 Capsella grandiflora
Cagra.0690s0047 5.0kb upstream 5.0kb upstream 8402 true Scaffold690: 185759-194160 Capsella grandiflora
Cagra.0690s0047 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 185759-190758 Capsella grandiflora
Cagra.0690s0047 5.0kb downstream 5.0kb downstream 8402 true Scaffold690: 190759-199160 Capsella grandiflora
Cagra.0690s0047 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 194161-199160 Capsella grandiflora
Cagra.0690s0047 10.0kb upstream 10.0kb upstream 13402 true Scaffold690: 180759-194160 Capsella grandiflora
Cagra.0690s0047 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 180759-190758 Capsella grandiflora
Cagra.0690s0047 10.0kb downstream 10.0kb downstream 13402 true Scaffold690: 190759-204160 Capsella grandiflora
Cagra.0690s0047 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 194161-204160 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121779855 5273 Angiosperm View MSA
122373415 5261 Brassicaceae View MSA
123841038 5264 Brassicales-Malvales View MSA
124350634 5266 SBM View MSA
124253797 5268 Malvidae View MSA
124069952 5270 Rosid View MSA
123744353 5271 Pentapetalae View MSA
122771039 5272 Eudicot View MSA
121051492 5274 Embryophyte View MSA
123091579 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain