Gene : Cagra.0690s0052 C. grandiflora v1.1
Defline:  (1 of 1) PF01029//PF13847 - NusB family (NusB) // Methyltransferase domain (Methyltransf_31) Genomic Order:  52
Name:  ? Cagra.0690s0052 Secondary Identifier:  ? PAC:28893742
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0690s0052 0.5kb upstream 0.5kb upstream 4296 true Scaffold690: 205987-210282 Capsella grandiflora
Cagra.0690s0052 0.5kb upstream 0.5kb upstream 500 false Scaffold690: 205987-206486 Capsella grandiflora
Cagra.0690s0052 0.5kb downstream 0.5kb downstream 4296 true Scaffold690: 206487-210782 Capsella grandiflora
Cagra.0690s0052 0.5kb downstream 0.5kb downstream 500 false Scaffold690: 210283-210782 Capsella grandiflora
Cagra.0690s0052 1.0kb upstream 1.0kb upstream 4796 true Scaffold690: 205487-210282 Capsella grandiflora
Cagra.0690s0052 1.0kb upstream 1.0kb upstream 1000 false Scaffold690: 205487-206486 Capsella grandiflora
Cagra.0690s0052 1.0kb downstream 1.0kb downstream 4796 true Scaffold690: 206487-211282 Capsella grandiflora
Cagra.0690s0052 1.0kb downstream 1.0kb downstream 1000 false Scaffold690: 210283-211282 Capsella grandiflora
Cagra.0690s0052 2.0kb upstream 2.0kb upstream 5796 true Scaffold690: 204487-210282 Capsella grandiflora
Cagra.0690s0052 2.0kb upstream 2.0kb upstream 2000 false Scaffold690: 204487-206486 Capsella grandiflora
Cagra.0690s0052 2.0kb downstream 2.0kb downstream 5796 true Scaffold690: 206487-212282 Capsella grandiflora
Cagra.0690s0052 2.0kb downstream 2.0kb downstream 2000 false Scaffold690: 210283-212282 Capsella grandiflora
Cagra.0690s0052 5.0kb upstream 5.0kb upstream 8796 true Scaffold690: 201487-210282 Capsella grandiflora
Cagra.0690s0052 5.0kb upstream 5.0kb upstream 5000 false Scaffold690: 201487-206486 Capsella grandiflora
Cagra.0690s0052 5.0kb downstream 5.0kb downstream 8796 true Scaffold690: 206487-215282 Capsella grandiflora
Cagra.0690s0052 5.0kb downstream 5.0kb downstream 5000 false Scaffold690: 210283-215282 Capsella grandiflora
Cagra.0690s0052 10.0kb upstream 10.0kb upstream 13796 true Scaffold690: 196487-210282 Capsella grandiflora
Cagra.0690s0052 10.0kb upstream 10.0kb upstream 10000 false Scaffold690: 196487-206486 Capsella grandiflora
Cagra.0690s0052 10.0kb downstream 10.0kb downstream 13796 true Scaffold690: 206487-220282 Capsella grandiflora
Cagra.0690s0052 10.0kb downstream 10.0kb downstream 10000 false Scaffold690: 210283-220282 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122334194 5261 Brassicaceae Singleton cluster - no MSA
123775060 5264 Brassicales-Malvales Singleton cluster - no MSA
124273476 5266 SBM Singleton cluster - no MSA
124129091 5268 Malvidae Singleton cluster - no MSA
124073549 5270 Rosid View MSA
123740047 5271 Pentapetalae View MSA
122787436 5272 Eudicot View MSA
122043907 5273 Angiosperm View MSA
121346553 5274 Embryophyte View MSA
123427921 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain