Gene : Cagra.0698s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR23074:SF86 - SPASTIN Genomic Order:  12
Name:  ? Cagra.0698s0012 Secondary Identifier:  ? PAC:28896232
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0698s0012 0.5kb upstream 0.5kb upstream 3342 true Scaffold698: 46039-49380 Capsella grandiflora
Cagra.0698s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold698: 46039-46538 Capsella grandiflora
Cagra.0698s0012 0.5kb downstream 0.5kb downstream 3342 true Scaffold698: 46539-49880 Capsella grandiflora
Cagra.0698s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold698: 49381-49880 Capsella grandiflora
Cagra.0698s0012 1.0kb upstream 1.0kb upstream 3842 true Scaffold698: 45539-49380 Capsella grandiflora
Cagra.0698s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold698: 45539-46538 Capsella grandiflora
Cagra.0698s0012 1.0kb downstream 1.0kb downstream 3842 true Scaffold698: 46539-50380 Capsella grandiflora
Cagra.0698s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold698: 49381-50380 Capsella grandiflora
Cagra.0698s0012 2.0kb upstream 2.0kb upstream 4842 true Scaffold698: 44539-49380 Capsella grandiflora
Cagra.0698s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold698: 44539-46538 Capsella grandiflora
Cagra.0698s0012 2.0kb downstream 2.0kb downstream 4842 true Scaffold698: 46539-51380 Capsella grandiflora
Cagra.0698s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold698: 49381-51380 Capsella grandiflora
Cagra.0698s0012 5.0kb upstream 5.0kb upstream 7842 true Scaffold698: 41539-49380 Capsella grandiflora
Cagra.0698s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold698: 41539-46538 Capsella grandiflora
Cagra.0698s0012 5.0kb downstream 5.0kb downstream 7842 true Scaffold698: 46539-54380 Capsella grandiflora
Cagra.0698s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold698: 49381-54380 Capsella grandiflora
Cagra.0698s0012 10.0kb upstream 10.0kb upstream 12842 true Scaffold698: 36539-49380 Capsella grandiflora
Cagra.0698s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold698: 36539-46538 Capsella grandiflora
Cagra.0698s0012 10.0kb downstream 10.0kb downstream 12842 true Scaffold698: 46539-59380 Capsella grandiflora
Cagra.0698s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold698: 49381-59380 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122362220 5261 Brassicaceae View MSA
123831003 5264 Brassicales-Malvales View MSA
124338043 5266 SBM View MSA
124250579 5268 Malvidae View MSA
124063142 5270 Rosid View MSA
123736430 5271 Pentapetalae View MSA
122793847 5272 Eudicot View MSA
122042209 5273 Angiosperm View MSA
123428918 5275 Viridiplantae View MSA
121344282 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain