Gene : Cagra.0698s0021 C. grandiflora v1.1
Defline:  (1 of 2) PTHR31529:SF3 - LOB DOMAIN-CONTAINING PROTEIN 18-RELATED Genomic Order:  21
Name:  ? Cagra.0698s0021 Secondary Identifier:  ? PAC:28896230
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0698s0021 0.5kb upstream 0.5kb upstream 2364 true Scaffold698: 79479-81842 Capsella grandiflora
Cagra.0698s0021 0.5kb upstream 0.5kb upstream 500 false Scaffold698: 81343-81842 Capsella grandiflora
Cagra.0698s0021 0.5kb downstream 0.5kb downstream 2364 true Scaffold698: 78979-81342 Capsella grandiflora
Cagra.0698s0021 0.5kb downstream 0.5kb downstream 500 false Scaffold698: 78979-79478 Capsella grandiflora
Cagra.0698s0021 1.0kb upstream 1.0kb upstream 2864 true Scaffold698: 79479-82342 Capsella grandiflora
Cagra.0698s0021 1.0kb upstream 1.0kb upstream 1000 false Scaffold698: 81343-82342 Capsella grandiflora
Cagra.0698s0021 1.0kb downstream 1.0kb downstream 2864 true Scaffold698: 78479-81342 Capsella grandiflora
Cagra.0698s0021 1.0kb downstream 1.0kb downstream 1000 false Scaffold698: 78479-79478 Capsella grandiflora
Cagra.0698s0021 2.0kb upstream 2.0kb upstream 3864 true Scaffold698: 79479-83342 Capsella grandiflora
Cagra.0698s0021 2.0kb upstream 2.0kb upstream 2000 false Scaffold698: 81343-83342 Capsella grandiflora
Cagra.0698s0021 2.0kb downstream 2.0kb downstream 3864 true Scaffold698: 77479-81342 Capsella grandiflora
Cagra.0698s0021 2.0kb downstream 2.0kb downstream 2000 false Scaffold698: 77479-79478 Capsella grandiflora
Cagra.0698s0021 5.0kb upstream 5.0kb upstream 6864 true Scaffold698: 79479-86342 Capsella grandiflora
Cagra.0698s0021 5.0kb upstream 5.0kb upstream 5000 false Scaffold698: 81343-86342 Capsella grandiflora
Cagra.0698s0021 5.0kb downstream 5.0kb downstream 6864 true Scaffold698: 74479-81342 Capsella grandiflora
Cagra.0698s0021 5.0kb downstream 5.0kb downstream 5000 false Scaffold698: 74479-79478 Capsella grandiflora
Cagra.0698s0021 10.0kb upstream 10.0kb upstream 11864 true Scaffold698: 79479-91342 Capsella grandiflora
Cagra.0698s0021 10.0kb upstream 10.0kb upstream 10000 false Scaffold698: 81343-91342 Capsella grandiflora
Cagra.0698s0021 10.0kb downstream 10.0kb downstream 11864 true Scaffold698: 69479-81342 Capsella grandiflora
Cagra.0698s0021 10.0kb downstream 10.0kb downstream 10000 false Scaffold698: 69479-79478 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378641 5261 Brassicaceae View MSA
123835040 5264 Brassicales-Malvales View MSA
124342816 5266 SBM View MSA
124253625 5268 Malvidae View MSA
124061672 5270 Rosid View MSA
123743730 5271 Pentapetalae View MSA
122791907 5272 Eudicot View MSA
122045879 5273 Angiosperm View MSA
121351593 5274 Embryophyte View MSA
123382239 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain