Gene : Cagra.0698s0023 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10366:SF425 - BRASSINOSTEROID METABOLIC PATHWAY PROTEIN BEN1 Genomic Order:  23
Name:  ? Cagra.0698s0023 Secondary Identifier:  ? PAC:28896238
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0698s0023 0.5kb upstream 0.5kb upstream 2743 true Scaffold698: 91429-94171 Capsella grandiflora
Cagra.0698s0023 0.5kb upstream 0.5kb upstream 500 false Scaffold698: 91429-91928 Capsella grandiflora
Cagra.0698s0023 0.5kb downstream 0.5kb downstream 2743 true Scaffold698: 91929-94671 Capsella grandiflora
Cagra.0698s0023 0.5kb downstream 0.5kb downstream 500 false Scaffold698: 94172-94671 Capsella grandiflora
Cagra.0698s0023 1.0kb upstream 1.0kb upstream 3243 true Scaffold698: 90929-94171 Capsella grandiflora
Cagra.0698s0023 1.0kb upstream 1.0kb upstream 1000 false Scaffold698: 90929-91928 Capsella grandiflora
Cagra.0698s0023 1.0kb downstream 1.0kb downstream 3243 true Scaffold698: 91929-95171 Capsella grandiflora
Cagra.0698s0023 1.0kb downstream 1.0kb downstream 1000 false Scaffold698: 94172-95171 Capsella grandiflora
Cagra.0698s0023 2.0kb upstream 2.0kb upstream 4243 true Scaffold698: 89929-94171 Capsella grandiflora
Cagra.0698s0023 2.0kb upstream 2.0kb upstream 2000 false Scaffold698: 89929-91928 Capsella grandiflora
Cagra.0698s0023 2.0kb downstream 2.0kb downstream 4243 true Scaffold698: 91929-96171 Capsella grandiflora
Cagra.0698s0023 2.0kb downstream 2.0kb downstream 2000 false Scaffold698: 94172-96171 Capsella grandiflora
Cagra.0698s0023 5.0kb upstream 5.0kb upstream 7243 true Scaffold698: 86929-94171 Capsella grandiflora
Cagra.0698s0023 5.0kb upstream 5.0kb upstream 5000 false Scaffold698: 86929-91928 Capsella grandiflora
Cagra.0698s0023 5.0kb downstream 5.0kb downstream 7243 true Scaffold698: 91929-99171 Capsella grandiflora
Cagra.0698s0023 5.0kb downstream 5.0kb downstream 5000 false Scaffold698: 94172-99171 Capsella grandiflora
Cagra.0698s0023 10.0kb upstream 10.0kb upstream 12243 true Scaffold698: 81929-94171 Capsella grandiflora
Cagra.0698s0023 10.0kb upstream 10.0kb upstream 10000 false Scaffold698: 81929-91928 Capsella grandiflora
Cagra.0698s0023 10.0kb downstream 10.0kb downstream 12243 true Scaffold698: 91929-104171 Capsella grandiflora
Cagra.0698s0023 10.0kb downstream 10.0kb downstream 10000 false Scaffold698: 94172-104171 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122031301 5273 Angiosperm View MSA
122367631 5261 Brassicaceae View MSA
123840749 5264 Brassicales-Malvales View MSA
124347312 5266 SBM View MSA
124245260 5268 Malvidae View MSA
124066855 5270 Rosid View MSA
123745083 5271 Pentapetalae View MSA
122790638 5272 Eudicot View MSA
121300366 5274 Embryophyte View MSA
123428289 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain