Gene : Cagra.0684s0044 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11751:SF418 - 1-AMINOCYCLOPROPANE-1-CARBOXYLATE SYNTHASE 7 Genomic Order:  44
Name:  ? Cagra.0684s0044 Secondary Identifier:  ? PAC:28908090
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ETHYL-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-7270 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0684s0044 0.5kb upstream 0.5kb upstream 2125 true Scaffold684: 126057-128181 Capsella grandiflora
Cagra.0684s0044 0.5kb upstream 0.5kb upstream 500 false Scaffold684: 127682-128181 Capsella grandiflora
Cagra.0684s0044 0.5kb downstream 0.5kb downstream 2125 true Scaffold684: 125557-127681 Capsella grandiflora
Cagra.0684s0044 0.5kb downstream 0.5kb downstream 500 false Scaffold684: 125557-126056 Capsella grandiflora
Cagra.0684s0044 1.0kb upstream 1.0kb upstream 2625 true Scaffold684: 126057-128681 Capsella grandiflora
Cagra.0684s0044 1.0kb upstream 1.0kb upstream 1000 false Scaffold684: 127682-128681 Capsella grandiflora
Cagra.0684s0044 1.0kb downstream 1.0kb downstream 2625 true Scaffold684: 125057-127681 Capsella grandiflora
Cagra.0684s0044 1.0kb downstream 1.0kb downstream 1000 false Scaffold684: 125057-126056 Capsella grandiflora
Cagra.0684s0044 2.0kb upstream 2.0kb upstream 3625 true Scaffold684: 126057-129681 Capsella grandiflora
Cagra.0684s0044 2.0kb upstream 2.0kb upstream 2000 false Scaffold684: 127682-129681 Capsella grandiflora
Cagra.0684s0044 2.0kb downstream 2.0kb downstream 3625 true Scaffold684: 124057-127681 Capsella grandiflora
Cagra.0684s0044 2.0kb downstream 2.0kb downstream 2000 false Scaffold684: 124057-126056 Capsella grandiflora
Cagra.0684s0044 5.0kb upstream 5.0kb upstream 6625 true Scaffold684: 126057-132681 Capsella grandiflora
Cagra.0684s0044 5.0kb upstream 5.0kb upstream 5000 false Scaffold684: 127682-132681 Capsella grandiflora
Cagra.0684s0044 5.0kb downstream 5.0kb downstream 6625 true Scaffold684: 121057-127681 Capsella grandiflora
Cagra.0684s0044 5.0kb downstream 5.0kb downstream 5000 false Scaffold684: 121057-126056 Capsella grandiflora
Cagra.0684s0044 10.0kb upstream 10.0kb upstream 11625 true Scaffold684: 126057-137681 Capsella grandiflora
Cagra.0684s0044 10.0kb upstream 10.0kb upstream 10000 false Scaffold684: 127682-137681 Capsella grandiflora
Cagra.0684s0044 10.0kb downstream 10.0kb downstream 11625 true Scaffold684: 116057-127681 Capsella grandiflora
Cagra.0684s0044 10.0kb downstream 10.0kb downstream 10000 false Scaffold684: 116057-126056 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366123 5261 Brassicaceae View MSA
123834026 5264 Brassicales-Malvales View MSA
124339921 5266 SBM View MSA
124241890 5268 Malvidae View MSA
124060897 5270 Rosid View MSA
123744717 5271 Pentapetalae View MSA
122791155 5272 Eudicot View MSA
122050984 5273 Angiosperm View MSA
121312233 5274 Embryophyte View MSA
123428176 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain