Gene : Cagra.0686s0042 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  42
Name:  ? Cagra.0686s0042 Secondary Identifier:  ? PAC:28900967
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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0042 0.5kb upstream 0.5kb upstream 1971 true Scaffold686: 151222-153192 Capsella grandiflora
Cagra.0686s0042 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 152693-153192 Capsella grandiflora
Cagra.0686s0042 0.5kb downstream 0.5kb downstream 1971 true Scaffold686: 150722-152692 Capsella grandiflora
Cagra.0686s0042 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 150722-151221 Capsella grandiflora
Cagra.0686s0042 1.0kb upstream 1.0kb upstream 2471 true Scaffold686: 151222-153692 Capsella grandiflora
Cagra.0686s0042 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 152693-153692 Capsella grandiflora
Cagra.0686s0042 1.0kb downstream 1.0kb downstream 2471 true Scaffold686: 150222-152692 Capsella grandiflora
Cagra.0686s0042 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 150222-151221 Capsella grandiflora
Cagra.0686s0042 2.0kb upstream 2.0kb upstream 3471 true Scaffold686: 151222-154692 Capsella grandiflora
Cagra.0686s0042 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 152693-154692 Capsella grandiflora
Cagra.0686s0042 2.0kb downstream 2.0kb downstream 3471 true Scaffold686: 149222-152692 Capsella grandiflora
Cagra.0686s0042 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 149222-151221 Capsella grandiflora
Cagra.0686s0042 5.0kb upstream 5.0kb upstream 6471 true Scaffold686: 151222-157692 Capsella grandiflora
Cagra.0686s0042 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 152693-157692 Capsella grandiflora
Cagra.0686s0042 5.0kb downstream 5.0kb downstream 6471 true Scaffold686: 146222-152692 Capsella grandiflora
Cagra.0686s0042 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 146222-151221 Capsella grandiflora
Cagra.0686s0042 10.0kb upstream 10.0kb upstream 11471 true Scaffold686: 151222-162692 Capsella grandiflora
Cagra.0686s0042 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 152693-162692 Capsella grandiflora
Cagra.0686s0042 10.0kb downstream 10.0kb downstream 11471 true Scaffold686: 141222-152692 Capsella grandiflora
Cagra.0686s0042 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 141222-151221 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122380559 5261 Brassicaceae View MSA
123834859 5264 Brassicales-Malvales View MSA
124321972 5266 SBM View MSA
124250234 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain