Gene : Cagra.0686s0048 C. grandiflora v1.1
Defline:  (1 of 46) KOG1987 - Speckle-type POZ protein SPOP and related proteins with TRAF, MATH and BTB/POZ domains Genomic Order:  48
Name:  ? Cagra.0686s0048 Secondary Identifier:  ? PAC:28901055
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0686s0048 0.5kb upstream 0.5kb upstream 1877 true Scaffold686: 165888-167764 Capsella grandiflora
Cagra.0686s0048 0.5kb upstream 0.5kb upstream 500 false Scaffold686: 167265-167764 Capsella grandiflora
Cagra.0686s0048 0.5kb downstream 0.5kb downstream 1877 true Scaffold686: 165388-167264 Capsella grandiflora
Cagra.0686s0048 0.5kb downstream 0.5kb downstream 500 false Scaffold686: 165388-165887 Capsella grandiflora
Cagra.0686s0048 1.0kb upstream 1.0kb upstream 2377 true Scaffold686: 165888-168264 Capsella grandiflora
Cagra.0686s0048 1.0kb upstream 1.0kb upstream 1000 false Scaffold686: 167265-168264 Capsella grandiflora
Cagra.0686s0048 1.0kb downstream 1.0kb downstream 2377 true Scaffold686: 164888-167264 Capsella grandiflora
Cagra.0686s0048 1.0kb downstream 1.0kb downstream 1000 false Scaffold686: 164888-165887 Capsella grandiflora
Cagra.0686s0048 2.0kb upstream 2.0kb upstream 3377 true Scaffold686: 165888-169264 Capsella grandiflora
Cagra.0686s0048 2.0kb upstream 2.0kb upstream 2000 false Scaffold686: 167265-169264 Capsella grandiflora
Cagra.0686s0048 2.0kb downstream 2.0kb downstream 3377 true Scaffold686: 163888-167264 Capsella grandiflora
Cagra.0686s0048 2.0kb downstream 2.0kb downstream 2000 false Scaffold686: 163888-165887 Capsella grandiflora
Cagra.0686s0048 5.0kb upstream 5.0kb upstream 6377 true Scaffold686: 165888-172264 Capsella grandiflora
Cagra.0686s0048 5.0kb upstream 5.0kb upstream 5000 false Scaffold686: 167265-172264 Capsella grandiflora
Cagra.0686s0048 5.0kb downstream 5.0kb downstream 6377 true Scaffold686: 160888-167264 Capsella grandiflora
Cagra.0686s0048 5.0kb downstream 5.0kb downstream 5000 false Scaffold686: 160888-165887 Capsella grandiflora
Cagra.0686s0048 10.0kb upstream 10.0kb upstream 11377 true Scaffold686: 165888-177264 Capsella grandiflora
Cagra.0686s0048 10.0kb upstream 10.0kb upstream 10000 false Scaffold686: 167265-177264 Capsella grandiflora
Cagra.0686s0048 10.0kb downstream 10.0kb downstream 11377 true Scaffold686: 155888-167264 Capsella grandiflora
Cagra.0686s0048 10.0kb downstream 10.0kb downstream 10000 false Scaffold686: 155888-165887 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121665424 5273 Angiosperm View MSA
122375875 5261 Brassicaceae View MSA
123801079 5264 Brassicales-Malvales View MSA
124298420 5266 SBM View MSA
124150069 5268 Malvidae View MSA
124050250 5270 Rosid View MSA
123619785 5271 Pentapetalae View MSA
122654221 5272 Eudicot View MSA
123429159 5275 Viridiplantae View MSA
120937392 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain